RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 EPHA2P29317 976 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 MC5RP33032 325 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 CAMPP49913 170 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 MFAP4P55083 255 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 SNU13P55769 128 aaKnown RBP3.4□□□□□ -1.87
VPS8-219ENST00000469479 NDPQ00604 133 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 LIPEQ05469 1076 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 UBE2V2Q15819 145 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 UTF1Q5T230 341 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 RSBN1Q5VWQ0 802 aaPredicted RBP3.4□□□□□ -1.87
VPS8-219ENST00000469479 ZNF57Q68EA5 555 aaPredicted RBP3.4□□□□□ -1.87
VPS8-219ENST00000469479 OR4A47Q6IF82 309 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 FAM71F2Q6NXP2 309 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 Q6P435 159 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 TRAT1Q6PIZ9 186 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 UTS2BQ765I0 119 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 ZNF554Q86TJ5 538 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 FAM223AQ8IWN6 122 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 STX19Q8N4C7 294 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 ZNF645Q8N7E2 425 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 LFNGQ8NES3 379 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 OR8D4Q8NGM9 314 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 OR1L6Q8NGR2 347 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 TEX47Q8TBZ9 253 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 CASTOR1Q8WTX7 329 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 GHSRQ92847 366 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 ARL11Q969Q4 196 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 MARC2Q969Z3 335 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 GALNT14Q96FL9 552 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 RDH12Q96NR8 316 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 SPAG8Q99932 426 aaPredicted RBP3.4□□□□□ -1.87
VPS8-219ENST00000469479 RARRES2Q99969 163 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 HOPXQ9BPY8 73 aaPredicted RBP3.4□□□□□ -1.87
VPS8-219ENST00000469479 NDUFAF3Q9BU61 184 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 OR51V1Q9H2C8 321 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 INTS9Q9NV88 658 aaKnown RBP3.4□□□□□ -1.87
VPS8-219ENST00000469479 DNAH2Q9P225 4427 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 RCC2Q9P258 522 aaKnown RBP3.4□□□□□ -1.87
VPS8-219ENST00000469479 GNG12Q9UBI6 72 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 OR52A1Q9UKL2 312 aa3.4□□□□□ -1.87
VPS8-219ENST00000469479 OR5H14A6NHG9 310 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 C2orf70A6NJV1 201 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 IFNA10P01566 189 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 MT-ND2P03891 347 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 HMGN1P05114 100 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 FABP3P05413 133 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 RPSAP08865 295 aaKnown RBP3.39□□□□□ -1.87
VPS8-219ENST00000469479 HOXB5P09067 269 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 GSTT2P0CG29 244 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 GSTT2BP0CG30 244 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 CTRB1P17538 263 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 VHLP40337 213 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 CMC4P56277 68 aaPredicted RBP3.39□□□□□ -1.87
VPS8-219ENST00000469479 BRWD1-AS2P59051 145 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 KRTAP10-1P60331 282 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 GK3PQ14409 553 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 CDK5R1Q15078 307 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 RNF212Q495C1 297 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 C6orf141Q5SZD1 244 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 C6orf183Q5T699 404 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 CTRB2Q6GPI1 263 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 ELP2Q6IA86 826 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 Q6ZR54 194 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 RBPMS2Q6ZRY4 209 aaKnown RBP3.39□□□□□ -1.87
VPS8-219ENST00000469479 LINC00596Q86U02 117 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 TBC1D26Q86UD7 250 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 TMEM61Q8N0U2 210 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 OR4A5Q8NH83 315 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 CNIH3Q8TBE1 160 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 FRZBQ92765 325 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 FAM210BQ96KR6 192 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 OPALINQ96PE5 141 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 TSNAXQ99598 290 aaKnown RBP3.39□□□□□ -1.87
VPS8-219ENST00000469479 KCTD14Q9BQ13 255 aaPredicted RBP3.39□□□□□ -1.87
VPS8-219ENST00000469479 DGCR6LQ9BY27 220 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 FBXL15Q9H469 300 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 RNF167Q9H6Y7 350 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 MED20Q9H944 212 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 RPL36Q9Y3U8 105 aaKnown RBP3.39□□□□□ -1.87
VPS8-219ENST00000469479 V9GYQ6 96 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 DNAH17Q9UFH2 4485 aa3.39□□□□□ -1.87
VPS8-219ENST00000469479 DYNC1H1Q14204 4646 aaKnown RBP3.39□□□□□ -1.87
VPS8-219ENST00000469479 A6NIN4 97 aa3.38□□□□□ -1.87
VPS8-219ENST00000469479 MPTX1A8MV57 137 aa3.38□□□□□ -1.87
VPS8-219ENST00000469479 A8MWP6 167 aa3.38□□□□□ -1.87
VPS8-219ENST00000469479 M0R2N4 97 aa3.38□□□□□ -1.87
VPS8-219ENST00000469479 EBAG9O00559 213 aa3.38□□□□□ -1.87
VPS8-219ENST00000469479 GGCTO75223 188 aaKnown RBP3.38□□□□□ -1.87
VPS8-219ENST00000469479 CA11O75493 328 aa3.38□□□□□ -1.87
VPS8-219ENST00000469479 SRSF10O75494 262 aaKnown RBP3.38□□□□□ -1.87
VPS8-219ENST00000469479 DIRAS1O95057 198 aa3.38□□□□□ -1.87
VPS8-219ENST00000469479 CCNB2O95067 398 aa3.38□□□□□ -1.87
VPS8-219ENST00000469479 KRT8P05787 483 aa3.38□□□□□ -1.87
VPS8-219ENST00000469479 MYOD1P15172 320 aa3.38□□□□□ -1.87
VPS8-219ENST00000469479 CBLN1P23435 193 aa3.38□□□□□ -1.87
VPS8-219ENST00000469479 MNAT1P51948 309 aa3.38□□□□□ -1.87
VPS8-219ENST00000469479 FAM106AQ4KMX7 169 aa3.38□□□□□ -1.87
VPS8-219ENST00000469479 TMEM41BQ5BJD5 291 aa3.38□□□□□ -1.87
VPS8-219ENST00000469479 CT45A1Q5HYN5 189 aa3.38□□□□□ -1.87
VPS8-219ENST00000469479 LY6G6FQ5SQ64 297 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms