RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 FAM58AQ8N1B3 248 aa8.65□□□□□ -1.02
CLIP4-208ENST00000456385 AGBL5Q8NDL9 886 aa8.65□□□□□ -1.02
CLIP4-208ENST00000456385 TSTD1Q8NFU3 115 aa8.65□□□□□ -1.02
CLIP4-208ENST00000456385 CCDC74BQ96LY2 380 aa8.65□□□□□ -1.02
CLIP4-208ENST00000456385 QTRT1Q9BXR0 403 aaKnown RBP8.65□□□□□ -1.02
CLIP4-208ENST00000456385 GNB4Q9HAV0 340 aa8.65□□□□□ -1.02
CLIP4-208ENST00000456385 TBL2Q9Y4P3 447 aaKnown RBP8.65□□□□□ -1.02
CLIP4-208ENST00000456385 ADAMTS20P59510 1910 aa8.65□□□□□ -1.03
CLIP4-208ENST00000456385 LRP5LA4QPB2 252 aa8.65□□□□□ -1.03
CLIP4-208ENST00000456385 ZNF503-AS2A6NEH8 195 aa8.65□□□□□ -1.03
CLIP4-208ENST00000456385 HYPMO75409 117 aa8.65□□□□□ -1.03
CLIP4-208ENST00000456385 RBMXL2O75526 392 aaKnown RBP8.65□□□□□ -1.03
CLIP4-208ENST00000456385 S1PR2O95136 353 aa8.65□□□□□ -1.03
CLIP4-208ENST00000456385 SYNGR4O95473 234 aa8.65□□□□□ -1.03
CLIP4-208ENST00000456385 ARL14EPLP0DKL9 152 aa8.65□□□□□ -1.03
CLIP4-208ENST00000456385 SUMO1P63165 101 aaKnown RBP8.65□□□□□ -1.03
CLIP4-208ENST00000456385 Q6ZN92 141 aa8.65□□□□□ -1.03
CLIP4-208ENST00000456385 GGNQ86UU5 652 aa8.65□□□□□ -1.03
CLIP4-208ENST00000456385 ZNF808Q8N4W9 903 aaPredicted RBP8.65□□□□□ -1.03
CLIP4-208ENST00000456385 OR4B1Q8NGF8 309 aa8.65□□□□□ -1.03
CLIP4-208ENST00000456385 RCHY1Q96PM5 261 aa8.65□□□□□ -1.03
CLIP4-208ENST00000456385 TUBG2Q9NRH3 451 aa8.65□□□□□ -1.03
CLIP4-208ENST00000456385 TRAPPC2LQ9UL33 140 aa8.65□□□□□ -1.03
CLIP4-208ENST00000456385 SLC45A2Q9UMX9 530 aa8.65□□□□□ -1.03
CLIP4-208ENST00000456385 USF3Q68DE3 2245 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 IGHV3-64DA0A0J9YX35 117 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 SNURFLB1AK76 121 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 RRHO14718 337 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 B3GALT5-AS1P59052 145 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 TGFBR3Q03167 851 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 PCOLCEQ15113 449 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 MAJINQ3KP22 176 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 KIAA1644Q3SXP7 199 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 C1orf174Q8IYL3 243 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 CADM4Q8NFZ8 388 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 STARD4Q96DR4 205 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 C5orf30Q96GV9 206 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 RNF2Q99496 336 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 TXN2Q99757 166 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 WNT10AQ9GZT5 417 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 NRN1Q9NPD7 142 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 DEPPQ9NTK1 212 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 LAMTOR2Q9Y2Q5 125 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 CEP290O15078 2479 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 FREM1Q5H8C1 2179 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 A0A1W2PPV4 95 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 NPIPB11E5RHQ5 1161 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 P0C879 139 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 IGLC2P0DOY2 106 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 IGLC3P0DOY3 106 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 CEACAM8P31997 349 aaPredicted RBP8.64□□□□□ -1.03
CLIP4-208ENST00000456385 FOXG1P55316 489 aaPredicted RBP8.64□□□□□ -1.03
CLIP4-208ENST00000456385 BRWD1-AS2P59051 145 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 VWC2Q2TAL6 325 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 LEMD1Q68G75 181 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 ATOH7Q8N100 152 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 ST6GALNAC3Q8NDV1 305 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 OR2M7Q8NG81 312 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 OR10D3Q8NH80 312 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 C22orf15Q8WYQ4 148 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.64□□□□□ -1.03
CLIP4-208ENST00000456385 IL36BQ9NZH7 164 aa8.64□□□□□ -1.03
CLIP4-208ENST00000456385 C19orf25Q9UFG5 118 aaPredicted RBP8.64□□□□□ -1.03
CLIP4-208ENST00000456385 KIAA1549Q9HCM3 1950 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 C17orf98A8MV24 154 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 C17orf112F2Z3M2 114 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 RFPL3SP0C7P2 107 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 PMCHP20382 165 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 CA6P23280 308 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 AMTP48728 403 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 LGALS4P56470 323 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 SLC35B1P78383 322 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 Q0VG73 95 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 UNQ5815/PRO19632Q6UWF5 114 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 OR2D2Q9H210 308 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 ZNF586Q9NXT0 402 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 YTHDF2Q9Y5A9 579 aaKnown RBP8.63□□□□□ -1.03
CLIP4-208ENST00000456385 HINT1P49773 126 aaPredicted RBP8.63□□□□□ -1.03
CLIP4-208ENST00000456385 HNRNPA3P51991 378 aaKnown RBP8.63□□□□□ -1.03
CLIP4-208ENST00000456385 RIPPLY2Q5TAB7 128 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 Q6P435 159 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 OR8I2Q8N0Y5 310 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 LYG1Q8N1E2 194 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 UQCR10Q9UDW1 63 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 RARRES3Q9UL19 164 aa8.63□□□□□ -1.03
CLIP4-208ENST00000456385 A0A1W2PS18 150 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 NKX6-3A6NJ46 265 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 GJE1A6NN92 205 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 CD1BP29016 333 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 RPL31P62899 125 aaKnown RBP8.62□□□□□ -1.03
CLIP4-208ENST00000456385 ARF1P84077 181 aaKnown RBP8.62□□□□□ -1.03
CLIP4-208ENST00000456385 COTL1Q14019 142 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 ZNF497Q6ZNH5 498 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 SYT13Q7L8C5 426 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 MMD2Q8IY49 270 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 FAM19A2Q8N3H0 131 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 ORAOV1Q8WV07 137 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 APH1AQ96BI3 265 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 C15orf62A8K5M9 175 aa8.62□□□□□ -1.03
CLIP4-208ENST00000456385 CLDN14O95500 239 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms