RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 EBPQ15125 230 aaKnown RBP0.57□□□□□ -2.32
LINC01239-201ENST00000433645 MIAQ16674 131 aa0.57□□□□□ -2.32
LINC01239-201ENST00000433645 DEFB115Q30KQ5 88 aa0.57□□□□□ -2.32
LINC01239-201ENST00000433645 FP248Q71RG6 208 aaPredicted RBP0.57□□□□□ -2.32
LINC01239-201ENST00000433645 LRRC34Q8IZ02 419 aa0.57□□□□□ -2.32
LINC01239-201ENST00000433645 DAND5Q8N907 189 aa0.57□□□□□ -2.32
LINC01239-201ENST00000433645 OR1L8Q8NGR8 309 aa0.57□□□□□ -2.32
LINC01239-201ENST00000433645 Q8WTZ3 238 aa0.57□□□□□ -2.32
LINC01239-201ENST00000433645 CYGBQ8WWM9 190 aa0.57□□□□□ -2.32
LINC01239-201ENST00000433645 SIKE1Q9BRV8 207 aa0.57□□□□□ -2.32
LINC01239-201ENST00000433645 TMEM208Q9BTX3 173 aa0.57□□□□□ -2.32
LINC01239-201ENST00000433645 ARFGEF3Q5TH69 2177 aa0.57□□□□□ -2.32
LINC01239-201ENST00000433645 OR6C6A6NF89 314 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 ZNF879B4DU55 563 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 ASS1P00966 412 aaKnown RBP0.56□□□□□ -2.32
LINC01239-201ENST00000433645 CRPP02741 224 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 LINC00614P0C842 121 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 PVALBP20472 110 aaPredicted RBP0.56□□□□□ -2.32
LINC01239-201ENST00000433645 MIPP30301 263 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 FXYD7P58549 80 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 TAS2R20P59543 309 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 TBPL1P62380 186 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 FAM45BPQ6NSW5 357 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 DCXRQ7Z4W1 244 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 ATP5L2Q7Z4Y8 100 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 LFNGQ8NES3 379 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 OR51T1Q8NGJ9 327 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 ZNF675Q8TD23 568 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 RNASEH2CQ8TDP1 164 aaKnown RBP0.56□□□□□ -2.32
LINC01239-201ENST00000433645 ADAT1Q9BUB4 502 aaKnown RBP0.56□□□□□ -2.32
LINC01239-201ENST00000433645 METTL9Q9H1A3 318 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 PARVAQ9NVD7 372 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 POLR3HQ9Y535 204 aaPredicted RBP0.56□□□□□ -2.32
LINC01239-201ENST00000433645 CACNA1BQ00975 2339 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 NAV1Q8NEY1 1877 aa0.56□□□□□ -2.32
LINC01239-201ENST00000433645 NUP160Q12769 1436 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 IGHV1-18A0A0C4DH31 117 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 A0A0J9YW62 118 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 METTL15A6NJ78 407 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 HMSDA8MTL9 139 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 ATP5G1P05496 136 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 F8A1P23610 371 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 TPI1P60174 286 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 AP1S1P61966 158 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 HIST1H4AP62805 103 aaKnown RBP0.55□□□□□ -2.32
LINC01239-201ENST00000433645 FABP5Q01469 135 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 ELOBQ15370 118 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 Q1T7F1 81 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 SLC36A2Q495M3 483 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 BAP18Q8IXM2 172 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 C1orf174Q8IYL3 243 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 RNASE6Q93091 150 aaKnown RBP0.55□□□□□ -2.32
LINC01239-201ENST00000433645 SFRP2Q96HF1 295 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 OR52A5Q9H2C5 316 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 C1orf109Q9NX04 203 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 TIMM9Q9Y5J7 89 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 ABCC12Q96J65 1359 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 RIMS2Q9UQ26 1411 aa0.55□□□□□ -2.32
LINC01239-201ENST00000433645 DAPL1A0PJW8 107 aa0.54□□□□□ -2.32
LINC01239-201ENST00000433645 C9JCJ5 164 aa0.54□□□□□ -2.32
LINC01239-201ENST00000433645 M0R381 172 aa0.54□□□□□ -2.32
LINC01239-201ENST00000433645 BRI3O95415 125 aa0.54□□□□□ -2.32
LINC01239-201ENST00000433645 KDELR2P33947 212 aa0.54□□□□□ -2.32
LINC01239-201ENST00000433645 CA5AP35218 305 aa0.54□□□□□ -2.32
LINC01239-201ENST00000433645 TMEM33P57088 247 aa0.54□□□□□ -2.32
LINC01239-201ENST00000433645 AKR1C1Q04828 323 aa0.54□□□□□ -2.32
LINC01239-201ENST00000433645 SLAMF1Q13291 335 aa0.54□□□□□ -2.32
LINC01239-201ENST00000433645 PLPPR5Q32ZL2 321 aa0.54□□□□□ -2.32
LINC01239-201ENST00000433645 AADACL4Q5VUY2 407 aa0.54□□□□□ -2.32
LINC01239-201ENST00000433645 C7orf65Q6ZTY9 151 aa0.54□□□□□ -2.32
LINC01239-201ENST00000433645 BLIDQ8IZY5 108 aa0.54□□□□□ -2.32
LINC01239-201ENST00000433645 DYNAPQ8N1N2 210 aa0.54□□□□□ -2.32
LINC01239-201ENST00000433645 OR13C8Q8NGS7 320 aa0.54□□□□□ -2.32
LINC01239-201ENST00000433645 AGPAT3Q9NRZ7 376 aa0.54□□□□□ -2.32
LINC01239-201ENST00000433645 TMEM94Q12767 1356 aa0.54□□□□□ -2.32
LINC01239-201ENST00000433645 SCAF11Q99590 1463 aaKnown RBP0.54□□□□□ -2.32
LINC01239-201ENST00000433645 TRAV7A0A075B6U4 112 aa0.53□□□□□ -2.32
LINC01239-201ENST00000433645 TEX50A0A1B0GTY4 177 aa0.53□□□□□ -2.32
LINC01239-201ENST00000433645 GOLGA6L10A6NI86 522 aa0.53□□□□□ -2.32
LINC01239-201ENST00000433645 MKRN2OSH3BPM6 223 aa0.53□□□□□ -2.32
LINC01239-201ENST00000433645 H7C2G1 150 aa0.53□□□□□ -2.32
LINC01239-201ENST00000433645 NEMFO60524 1076 aa0.53□□□□□ -2.32
LINC01239-201ENST00000433645 PRB4P10163 310 aaPredicted RBP0.53□□□□□ -2.32
LINC01239-201ENST00000433645 SLC36A1Q7Z2H8 476 aa0.53□□□□□ -2.32
LINC01239-201ENST00000433645 Q8N2B8 174 aa0.53□□□□□ -2.32
LINC01239-201ENST00000433645 ATP6V1C2Q8NEY4 427 aa0.53□□□□□ -2.32
LINC01239-201ENST00000433645 OR5L1Q8NGL2 311 aa0.53□□□□□ -2.32
LINC01239-201ENST00000433645 OR10D3Q8NH80 312 aa0.53□□□□□ -2.32
LINC01239-201ENST00000433645 ZNF75CPQ92670 426 aaPredicted RBP0.53□□□□□ -2.32
LINC01239-201ENST00000433645 TMA16Q96EY4 203 aaKnown RBP0.53□□□□□ -2.32
LINC01239-201ENST00000433645 RBP7Q96R05 134 aa0.53□□□□□ -2.32
LINC01239-201ENST00000433645 XAGE1AQ9HD64 81 aa0.53□□□□□ -2.32
LINC01239-201ENST00000433645 PCYT1BQ9Y5K3 369 aaPredicted RBP0.53□□□□□ -2.32
LINC01239-201ENST00000433645 GREB1Q4ZG55 1949 aa0.53□□□□□ -2.32
LINC01239-201ENST00000433645 A0A1W2PP64 1363 aa0.53□□□□□ -2.32
LINC01239-201ENST00000433645 STX10O60499 249 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 CREBL2O60519 120 aaPredicted RBP0.52□□□□□ -2.33
LINC01239-201ENST00000433645 KRT75O95678 551 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 HLA-DQB2P05538 268 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 LGALS1P09382 135 aaKnown RBP0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms