RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 PRAMEF5Q5TYX0 476 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 UQCC3Q6UW78 93 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 IL34Q6ZMJ4 242 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 SFT2D1Q8WV19 159 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 SCRT1Q9BWW7 348 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 MMP24Q9Y5R2 645 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 LRRC30A6NM36 301 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 FAM157AC9JC47 383 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 OPN1MWP04001 364 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 OPN1MW2P0DN77 364 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 OPN1MW3P0DN78 364 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 CCL3L1P16619 93 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 PTAFRP25105 342 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 CFHR2P36980 270 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 RPL35P42766 123 aaKnown RBP7.27□□□□□ -1.25
SNCA-206ENST00000420646 FGF8P55075 233 aaPredicted RBP7.27□□□□□ -1.25
SNCA-206ENST00000420646 MZT1Q08AG7 82 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 STUMQ69YW2 141 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 LYPD2Q6UXB3 125 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 H2BFWTQ7Z2G1 175 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 OR4C12Q96R67 309 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 QTRT1Q9BXR0 403 aaKnown RBP7.27□□□□□ -1.25
SNCA-206ENST00000420646 IFI27L2Q9H2X8 130 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 UBE2L5PA0A1B0GUS4 154 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 C17orf100A8MU93 164 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 E7EQL1 145 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 LY6HO94772 140 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 ELLP55199 621 aaPredicted RBP7.26□□□□□ -1.25
SNCA-206ENST00000420646 SSX7Q7RTT5 188 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 C1orf174Q8IYL3 243 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 LYG1Q8N1E2 194 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 LILRB2Q8N423 598 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 RAB40CQ96S21 281 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 ATP5SQ99766 215 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 JKAMPQ9P055 326 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 WSB1Q9Y6I7 421 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 MALRD1Q5VYJ5 2156 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 PLXNB1O43157 2135 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 ZNF98A6NK75 572 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 AKR1D1P51857 326 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 RPS23P62266 143 aaKnown RBP7.26□□□□□ -1.25
SNCA-206ENST00000420646 HTD2P86397 168 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 CATR1Q13166 79 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 LY6DQ14210 128 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 SPSB3Q6PJ21 355 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 SVBPQ8N300 66 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 LYPD6BQ8NI32 183 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 R3HDM4Q96D70 268 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 SAP30LQ9HAJ7 183 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 DSCAML1Q8TD84 2053 aa7.26□□□□□ -1.25
SNCA-206ENST00000420646 SAA2-SAA4A0A096LPE2 208 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 RNF212BA8MTL3 300 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 ADH4P08319 380 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 P0C879 139 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 SAA2P0DJI9 122 aaPredicted RBP7.25□□□□□ -1.25
SNCA-206ENST00000420646 IRF2P14316 349 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 TNFSF4P23510 183 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 GATA4P43694 442 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 REG1BP48304 166 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 DVL1P1P54792 670 aaPredicted RBP7.25□□□□□ -1.25
SNCA-206ENST00000420646 LCN15Q6UWW0 184 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 RPRMQ9NS64 109 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 MYO9AB2RTY4 2548 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 ARHGAP32A7KAX9 2087 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 KBTBD11-OT1A0A1B0GTJ5 212 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.25□□□□□ -1.25
SNCA-206ENST00000420646 CEBPZOSA8MTT3 80 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 SHISA9B4DS77 424 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 IFNA17P01571 189 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 CGB3P0DN86 165 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 CGB7P0DN87 165 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 TMPRSS3P57727 454 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 BAXQ07812 192 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 DMRTC2Q8IXT2 367 aaPredicted RBP7.25□□□□□ -1.25
SNCA-206ENST00000420646 ZNF525Q8N782 197 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 NUP37Q8NFH4 326 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 C14orf79Q96F83 325 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 ELOVL5Q9NYP7 299 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 ABCA1O95477 2261 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 CCL21O00585 134 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 H2AFB1P0C5Y9 115 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 ZNF788Q6ZQV5 615 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 ZNF561Q8N587 486 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 PPP1R35Q8TAP8 253 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 CD300LFQ8TDQ1 290 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 DTD1Q8TEA8 209 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 H1FXQ92522 213 aaKnown RBP7.25□□□□□ -1.25
SNCA-206ENST00000420646 SEC11CQ9BY50 192 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.25□□□□□ -1.25
SNCA-206ENST00000420646 HSPB7Q9UBY9 170 aa7.25□□□□□ -1.25
SNCA-206ENST00000420646 ABCA12Q86UK0 2595 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 TRGV10A0A0A0MS01 117 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 SIAH2O43255 324 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 IFNA5P01569 189 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 IGKV1-16P04430 117 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 SLC25A6P12236 298 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 TAS2R30P59541 319 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 DIAPH2-AS1Q14236 149 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 AKR1C8PQ5T2L2 129 aa7.24□□□□□ -1.25
SNCA-206ENST00000420646 LURAP1LQ8IV03 231 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms