RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 TMEM187Q14656 261 aa16.06■□□□□ 0.16
CSPG5-202ENST00000383738 OR4X1Q8NH49 305 aa16.06■□□□□ 0.16
CSPG5-202ENST00000383738 WDYHV1Q96HA8 205 aa16.06■□□□□ 0.16
CSPG5-202ENST00000383738 EPG5Q9HCE0 2579 aa16.06■□□□□ 0.16
CSPG5-202ENST00000383738 CDC34P49427 236 aaPredicted RBP16.06■□□□□ 0.16
CSPG5-202ENST00000383738 OR5A2Q8NGI9 324 aa16.06■□□□□ 0.16
CSPG5-202ENST00000383738 IMMP2LQ96T52 175 aa16.06■□□□□ 0.16
CSPG5-202ENST00000383738 CCL13Q99616 98 aa16.06■□□□□ 0.16
CSPG5-202ENST00000383738 A1L4Q6 167 aa16.06■□□□□ 0.16
CSPG5-202ENST00000383738 J3QT63 122 aa16.06■□□□□ 0.16
CSPG5-202ENST00000383738 REG1BP48304 166 aa16.06■□□□□ 0.16
CSPG5-202ENST00000383738 MEF2BQ02080 365 aaPredicted RBP16.06■□□□□ 0.16
CSPG5-202ENST00000383738 OR5AU1Q8NGC0 362 aa16.06■□□□□ 0.16
CSPG5-202ENST00000383738 PLXNA2O75051 1894 aa16.06■□□□□ 0.16
CSPG5-202ENST00000383738 LTBP2Q14767 1821 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 A0A0U1RQV5 110 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 SNURFLB1AK76 121 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 B4DEV8 164 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 IGFBP3P17936 291 aaPredicted RBP16.05■□□□□ 0.16
CSPG5-202ENST00000383738 OR10J1P30954 320 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 FHL1Q13642 323 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 FDX2Q6P4F2 183 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 CALHM1Q8IU99 346 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 HIST3H2BBQ8N257 126 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 ZIC4Q8N9L1 334 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 S1PR3Q99500 378 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 ZNF581Q9P0T4 197 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 IL36RNQ9UBH0 155 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 PIGBOS1A0A0B4J2F0 54 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 SPCS3P61009 180 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 MOB3BQ86TA1 216 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 OR10S1Q8NGN2 331 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 GALNT14Q96FL9 552 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 OR4C12Q96R67 309 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 PRO3102Q9H379 93 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 FOXD3Q9UJU5 478 aaPredicted RBP16.05■□□□□ 0.16
CSPG5-202ENST00000383738 TIGITQ495A1 244 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 RNASEKQ6P5S7 137 aaKnown RBP16.05■□□□□ 0.16
CSPG5-202ENST00000383738 HIPK2Q9H2X6 1198 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 RHBDL1O75783 438 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 HLA-GP17693 338 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 TMEM211Q6ICI0 200 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 LEAP2Q969E1 77 aa16.05■□□□□ 0.16
CSPG5-202ENST00000383738 MELTFP08582 738 aa16.04■□□□□ 0.16
CSPG5-202ENST00000383738 KRTCAP3Q53RY4 240 aa16.04■□□□□ 0.16
CSPG5-202ENST00000383738 TNFRSF19Q9NS68 423 aa16.04■□□□□ 0.16
CSPG5-202ENST00000383738 TECRQ9NZ01 308 aaKnown RBP16.04■□□□□ 0.16
CSPG5-202ENST00000383738 PITX3O75364 302 aa16.04■□□□□ 0.16
CSPG5-202ENST00000383738 G6PCP35575 357 aa16.04■□□□□ 0.16
CSPG5-202ENST00000383738 KIAA1671Q9BY89 1806 aa16.04■□□□□ 0.16
CSPG5-202ENST00000383738 CTSSP25774 331 aa16.03■□□□□ 0.16
CSPG5-202ENST00000383738 LRRC10Q5BKY1 277 aa16.03■□□□□ 0.16
CSPG5-202ENST00000383738 TMEM183AQ8IXX5 376 aa16.03■□□□□ 0.16
CSPG5-202ENST00000383738 LIN7CQ9NUP9 197 aaKnown RBP16.03■□□□□ 0.16
CSPG5-202ENST00000383738 USP9YO00507 2555 aaPredicted RBP16.03■□□□□ 0.16
CSPG5-202ENST00000383738 IGKV1-9A0A0C4DH69 117 aa16.03■□□□□ 0.16
CSPG5-202ENST00000383738 PGPEP1LA6NFU8 196 aa16.03■□□□□ 0.16
CSPG5-202ENST00000383738 ZNF716A6NP11 495 aa16.03■□□□□ 0.16
CSPG5-202ENST00000383738 CECR9P0C854 216 aa16.03■□□□□ 0.16
CSPG5-202ENST00000383738 IGHV1-2P23083 117 aa16.03■□□□□ 0.16
CSPG5-202ENST00000383738 CCKARP32238 428 aa16.03■□□□□ 0.16
CSPG5-202ENST00000383738 OTX1P32242 354 aaPredicted RBP16.03■□□□□ 0.16
CSPG5-202ENST00000383738 UCNP55089 124 aa16.03■□□□□ 0.16
CSPG5-202ENST00000383738 PRB3Q04118 309 aaPredicted RBP16.03■□□□□ 0.16
CSPG5-202ENST00000383738 H1FOOQ8IZA3 346 aaPredicted RBP16.03■□□□□ 0.16
CSPG5-202ENST00000383738 OR5B3Q8NH48 314 aa16.03■□□□□ 0.16
CSPG5-202ENST00000383738 Q8IYB0 196 aa16.03■□□□□ 0.16
CSPG5-202ENST00000383738 TMEM222Q9H0R3 208 aa16.03■□□□□ 0.16
CSPG5-202ENST00000383738 PARLQ9H300 379 aa16.03■□□□□ 0.16
CSPG5-202ENST00000383738 UNQ6494/PRO21346Q6UXR6 183 aa16.02■□□□□ 0.16
CSPG5-202ENST00000383738 ZNF818PQ6ZRF7 136 aa16.02■□□□□ 0.16
CSPG5-202ENST00000383738 GGNQ86UU5 652 aa16.02■□□□□ 0.16
CSPG5-202ENST00000383738 SRD5A3Q9H8P0 318 aa16.02■□□□□ 0.16
CSPG5-202ENST00000383738 STUMQ69YW2 141 aa16.02■□□□□ 0.16
CSPG5-202ENST00000383738 Q6ZT83 130 aa16.02■□□□□ 0.16
CSPG5-202ENST00000383738 OR10G8Q8NGN5 311 aa16.02■□□□□ 0.16
CSPG5-202ENST00000383738 GINS3Q9BRX5 216 aa16.02■□□□□ 0.16
CSPG5-202ENST00000383738 CISD1Q9NZ45 108 aaKnown RBP16.02■□□□□ 0.16
CSPG5-202ENST00000383738 NUP210Q8TEM1 1887 aaPredicted RBP16.02■□□□□ 0.15
CSPG5-202ENST00000383738 TRAV38-1A0A0B4J264 116 aa16.02■□□□□ 0.15
CSPG5-202ENST00000383738 DIRC3C9JPN6 131 aa16.02■□□□□ 0.15
CSPG5-202ENST00000383738 CBLN1P23435 193 aa16.02■□□□□ 0.15
CSPG5-202ENST00000383738 CEACAM21Q3KPI0 293 aa16.02■□□□□ 0.15
CSPG5-202ENST00000383738 ACSF3Q4G176 576 aaPredicted RBP16.02■□□□□ 0.15
CSPG5-202ENST00000383738 Q56UQ5 140 aa16.02■□□□□ 0.15
CSPG5-202ENST00000383738 GTF3AQ92664 365 aaKnown RBP16.02■□□□□ 0.15
CSPG5-202ENST00000383738 TMEM54Q969K7 222 aa16.02■□□□□ 0.15
CSPG5-202ENST00000383738 NDUFAF3Q9BU61 184 aa16.02■□□□□ 0.15
CSPG5-202ENST00000383738 TUBD1Q9UJT1 453 aa16.02■□□□□ 0.15
CSPG5-202ENST00000383738 OR4A8P0C604 315 aa16.01■□□□□ 0.15
CSPG5-202ENST00000383738 RBM11P57052 281 aaKnown RBP16.01■□□□□ 0.15
CSPG5-202ENST00000383738 C10orf128Q5T292 105 aa16.01■□□□□ 0.15
CSPG5-202ENST00000383738 RCC1LQ96I51 464 aaKnown RBP16.01■□□□□ 0.15
CSPG5-202ENST00000383738 EREGO14944 169 aa16.01■□□□□ 0.15
CSPG5-202ENST00000383738 TMEM11P17152 192 aa16.01■□□□□ 0.15
CSPG5-202ENST00000383738 ICAM4Q14773 271 aa16.01■□□□□ 0.15
CSPG5-202ENST00000383738 ASPHD2Q6ICH7 369 aa16.01■□□□□ 0.15
CSPG5-202ENST00000383738 TCF23Q7RTU1 214 aa16.01■□□□□ 0.15
CSPG5-202ENST00000383738 DMRTC2Q8IXT2 367 aaPredicted RBP16.01■□□□□ 0.15
CSPG5-202ENST00000383738 PCNX3Q9H6A9 2034 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms