RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 Q8WTZ3 238 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 NXT2Q9NPJ8 142 aaKnown RBP5.7□□□□□ -1.5
VPS13B-202ENST00000357162 K7N7A8 449 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 HIST1H2BKO60814 126 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 HIST1H2BJP06899 126 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 HIST1H2BOP23527 126 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 HIST1H2BBP33778 126 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 HIST1H2BDP58876 126 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 HIST1H2BCP62807 126 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 MGAT2Q10469 447 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 HIST2H2BEQ16778 126 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-202ENST00000357162 OR1N2Q8NGR9 330 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 HIST1H2BHQ93079 126 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 HIST1H2BNQ99877 126 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 HIST1H2BMQ99879 126 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 MRPL27Q9P0M9 148 aaKnown RBP5.7□□□□□ -1.5
VPS13B-202ENST00000357162 DNM1P46Q6ZS02 220 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 OR8I2Q8N0Y5 310 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 OR13H1Q8NG92 308 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 ARPC1AQ92747 370 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 MRGPRFQ96AM1 343 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 EMC6Q9BV81 110 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 RPL8P62917 257 aaKnown RBP5.7□□□□□ -1.5
VPS13B-202ENST00000357162 SF3B6Q9Y3B4 125 aaKnown RBP5.7□□□□□ -1.5
VPS13B-202ENST00000357162 PAGE4O60829 102 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 RPL11P62913 178 aaKnown RBP5.7□□□□□ -1.5
VPS13B-202ENST00000357162 OR10AD1Q8NGE0 317 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 TMEM56-RWDD3S4R434 201 aa5.7□□□□□ -1.5
VPS13B-202ENST00000357162 NDUFB3O43676 98 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 SFTPCP11686 197 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 ZNF708P17019 499 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 SCCPDHQ8NBX0 429 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 CLDND2Q8NHS1 167 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 DERL1Q9BUN8 251 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 OPN3Q9H1Y3 402 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-202ENST00000357162 C8orf88P0DMB2 117 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 ACRP10323 421 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 FGF8P55075 233 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-202ENST00000357162 ZNF816Q0VGE8 651 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-202ENST00000357162 DEFB133Q30KQ1 61 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 OR52E5Q8NH55 327 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 OR2J1Q9GZK6 312 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 KIF26AQ9ULI4 1882 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-202ENST00000357162 C20orf144Q9BQM9 153 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 ZNF785A8K8V0 405 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 OR4P4Q8NGL7 312 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 BAHCC1Q9P281 2608 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 CTGFP29279 349 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 CKS2P33552 79 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 PSG6Q00889 435 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 ANKRD34AQ69YU3 496 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 LYZL2Q7Z4W2 148 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 RAB1CQ92928 201 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 HIST1H4GQ99525 98 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 ABHD14AQ9BUJ0 271 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 SCGB1A1P11684 91 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 ZNF32P17041 273 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 OR4C13Q8NGP0 309 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 OSTCQ9NRP0 149 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 HEXA-AS1Q9H8Q6 139 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 ZNF257Q9Y2Q1 563 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 FTH1P19P0C7X4 201 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 MS4A7Q9GZW8 240 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-202ENST00000357162 MRPL18Q9H0U6 180 aaKnown RBP5.69□□□□□ -1.5
VPS13B-202ENST00000357162 ZNF324O75467 553 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-202ENST00000357162 CA1P00915 261 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-202ENST00000357162 IGLV3-21P80748 117 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-202ENST00000357162 HEPN1Q6WQI6 88 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 OR8A1Q8NGG7 326 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 SPRY1O43609 319 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-202ENST00000357162 HSPE1P61604 102 aaKnown RBP5.69□□□□□ -1.5
VPS13B-202ENST00000357162 ZNF774Q6NX45 483 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 WIPI1Q5MNZ9 446 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-202ENST00000357162 LILRA3Q8N6C8 439 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-202ENST00000357162 GVQW1Q8N7I0 195 aa5.69□□□□□ -1.5
VPS13B-202ENST00000357162 H3BP45 60 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 UPK3AO75631 287 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 CEACAM1P13688 526 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 NUBP1P53384 320 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 TCTN1Q2MV58 587 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 C9JCJ5 164 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 GLI4P10075 376 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 HARBI1Q96MB7 349 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 PRRT4C9JH25 899 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 TM4SF5O14894 197 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 ASIPP42127 132 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 C1orf194Q5T5A4 169 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 WFDC5Q8TCV5 224 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 GNRHR2Q96P88 292 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 PARLQ9H300 379 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 UFC1Q9Y3C8 167 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 PMVKQ15126 192 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 FAM71F2Q6NXP2 309 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 SIGMAR1Q99720 223 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 KLK13Q9UKR3 277 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 PPP1CCP36873 323 aaKnown RBP5.68□□□□□ -1.5
VPS13B-202ENST00000357162 HSD52Q0P140 79 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 CTHRC1Q96CG8 243 aa5.68□□□□□ -1.5
VPS13B-202ENST00000357162 NPCDR1Q9BY65 106 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms