RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 GSKIPQ9P0R6 139 aa13.4□□□□□ -0.26
PDLIM1-201ENST00000329399 PRELID3BQ9Y3B1 194 aa13.4□□□□□ -0.26
PDLIM1-201ENST00000329399 ARPC5O15511 151 aa13.39□□□□□ -0.27
PDLIM1-201ENST00000329399 IGHV4-38-2P0DP08 117 aa13.39□□□□□ -0.27
PDLIM1-201ENST00000329399 NMSQ5H8A3 153 aa13.39□□□□□ -0.27
PDLIM1-201ENST00000329399 FAM71F2Q6NXP2 309 aa13.39□□□□□ -0.27
PDLIM1-201ENST00000329399 SLC25A48Q6ZT89 311 aaKnown RBP13.39□□□□□ -0.27
PDLIM1-201ENST00000329399 KCNRGQ8N5I3 272 aa13.39□□□□□ -0.27
PDLIM1-201ENST00000329399 LINC00311Q8N616 119 aa13.39□□□□□ -0.27
PDLIM1-201ENST00000329399 OR51H1Q8NH63 302 aa13.39□□□□□ -0.27
PDLIM1-201ENST00000329399 LHFPL5Q8TAF8 219 aa13.39□□□□□ -0.27
PDLIM1-201ENST00000329399 ZNF596Q8TC21 504 aa13.39□□□□□ -0.27
PDLIM1-201ENST00000329399 TNFRSF14Q92956 283 aa13.39□□□□□ -0.27
PDLIM1-201ENST00000329399 RRNAD1Q96FB5 475 aaKnown RBP13.39□□□□□ -0.27
PDLIM1-201ENST00000329399 PLEKHA2Q9HB19 425 aa13.39□□□□□ -0.27
PDLIM1-201ENST00000329399 C19orf12Q9NSK7 152 aa13.39□□□□□ -0.27
PDLIM1-201ENST00000329399 COA4Q9NYJ1 87 aa13.39□□□□□ -0.27
PDLIM1-201ENST00000329399 PRR13Q9NZ81 148 aa13.39□□□□□ -0.27
PDLIM1-201ENST00000329399 A0A087X0M5 115 aa13.38□□□□□ -0.27
PDLIM1-201ENST00000329399 IGHV3-43A0A0B4J1X8 118 aa13.38□□□□□ -0.27
PDLIM1-201ENST00000329399 A0A1B0GX30 115 aa13.38□□□□□ -0.27
PDLIM1-201ENST00000329399 ST8SIA3O43173 380 aa13.38□□□□□ -0.27
PDLIM1-201ENST00000329399 TNFSF12O43508 249 aa13.38□□□□□ -0.27
PDLIM1-201ENST00000329399 IGHV3-43DP0DP04 118 aa13.38□□□□□ -0.27
PDLIM1-201ENST00000329399 EPHA1P21709 976 aa13.38□□□□□ -0.27
PDLIM1-201ENST00000329399 OPCMLQ14982 345 aa13.38□□□□□ -0.27
PDLIM1-201ENST00000329399 NDUFA5Q16718 116 aa13.38□□□□□ -0.27
PDLIM1-201ENST00000329399 TMUB2Q71RG4 321 aa13.38□□□□□ -0.27
PDLIM1-201ENST00000329399 ZNF439Q8NDP4 499 aa13.38□□□□□ -0.27
PDLIM1-201ENST00000329399 H1FXQ92522 213 aaKnown RBP13.38□□□□□ -0.27
PDLIM1-201ENST00000329399 S1PR3Q99500 378 aa13.38□□□□□ -0.27
PDLIM1-201ENST00000329399 PARP12Q9H0J9 701 aaKnown RBP13.38□□□□□ -0.27
PDLIM1-201ENST00000329399 RNF150Q9ULK6 438 aa13.38□□□□□ -0.27
PDLIM1-201ENST00000329399 E5RGE8 158 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 DEDDO75618 318 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 VENTXO95231 258 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 CXCL2P19875 107 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 PVALBP20472 110 aaPredicted RBP13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 DLX1P56177 255 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 IFITM2Q01629 132 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 PRB3Q04118 309 aaPredicted RBP13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 RAB32Q13637 225 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 KRTAP24-1Q3LI83 254 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 LRRC37A5PQ49AS3 106 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 OR4D5Q8NGN0 318 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 NANPQ8TBE9 248 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 TCTEX1D2Q8WW35 142 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 RNF126Q9BV68 326 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 IFI27L2Q9H2X8 130 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 PLSCR3Q9NRY6 295 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 MBD2Q9UBB5 411 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 NSG2Q9Y328 171 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 BOLA1Q9Y3E2 137 aa13.37□□□□□ -0.27
PDLIM1-201ENST00000329399 FAM90A9PA6NNJ1 464 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 C17orf98A8MV24 154 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 MPTX1A8MV57 137 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 FAM90A26D6RGX4 464 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 ST8SIA5O15466 376 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 LY86O95711 162 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 IFNA7P01567 189 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 DUTP33316 252 aaKnown RBP13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 THBS3P49746 956 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 CT45A1Q5HYN5 189 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 GPR157Q5UAW9 335 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 SLC51BQ86UW2 128 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 FAM71E2Q8N5Q1 922 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 CT45A3Q8NHU0 189 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 RNASE11Q8TAA1 199 aaKnown RBP13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 DCUN1D4Q92564 292 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 AQP10Q96PS8 301 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 AIFM2Q9BRQ8 373 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 ARL6Q9H0F7 186 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 MMP24Q9Y5R2 645 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 POMT1Q9Y6A1 747 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 ANK2Q01484 3957 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 KANTRA0A1W2PQU2 76 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 TAAR5O14804 337 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 HPRT1P00492 218 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 NFYBP25208 207 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 NKX2-1P43699 371 aaPredicted RBP13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 ARF6P62330 175 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 ZNF273Q14593 569 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 LTC4SQ16873 150 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 TUSC1Q2TAM9 212 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 ZNF585BQ52M93 769 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 BTNL3Q6UXE8 466 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 SPAG16Q8N0X2 631 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 LY6G5BQ8NDX9 201 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 TBX15Q96SF7 602 aa13.36□□□□□ -0.27
PDLIM1-201ENST00000329399 ENSAO43768 121 aaKnown RBP13.35□□□□□ -0.27
PDLIM1-201ENST00000329399 MBPP02686 304 aaPredicted RBP13.35□□□□□ -0.27
PDLIM1-201ENST00000329399 RRASP10301 218 aa13.35□□□□□ -0.27
PDLIM1-201ENST00000329399 OMGP23515 440 aa13.35□□□□□ -0.27
PDLIM1-201ENST00000329399 IL3RAP26951 378 aa13.35□□□□□ -0.27
PDLIM1-201ENST00000329399 LPAR6P43657 344 aa13.35□□□□□ -0.27
PDLIM1-201ENST00000329399 P2RY1P47900 373 aa13.35□□□□□ -0.27
PDLIM1-201ENST00000329399 ZNF134P52741 427 aa13.35□□□□□ -0.27
PDLIM1-201ENST00000329399 DLX6P56179 175 aa13.35□□□□□ -0.27
PDLIM1-201ENST00000329399 S100A10P60903 97 aa13.35□□□□□ -0.27
PDLIM1-201ENST00000329399 EIF5AP63241 154 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms