RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 PARD6GQ9BYG4 376 aaPredicted RBP11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 EWSR1Q01844 656 aaKnown RBP eCLIP11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 FOXB2Q5VYV0 432 aa11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 A0A0U1RQV5 110 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 GPX1P07203 203 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 FBXW9Q5XUX1 488 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 MARS2Q96GW9 593 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 HSPB9Q9BQS6 159 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 LEPROTL1O95214 131 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 XAF1Q6GPH4 301 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 PHLDA1Q8WV24 401 aaPredicted RBP11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 DUX5Q96PT3 197 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 QTRT1Q9BXR0 403 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 B4GALNT1Q00973 533 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 SOX21Q9Y651 276 aaPredicted RBP11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 IGHV4-34P06331 123 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 LIPFP07098 398 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 WNT5AP41221 380 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 RCC2Q9P258 522 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 MYO18BQ8IUG5 2567 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 RPL36A-HNRNPH2H7BZ11 118 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 PSG6Q00889 435 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 MEF2CQ06413 473 aaPredicted RBP11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 MRM2Q9UI43 246 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 TNFSF18Q9UNG2 199 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 PXMP4Q9Y6I8 212 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 FAM208BQ5VWN6 2430 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 C7orf77A4D0Y5 90 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 CDIPTO14735 213 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 PSG2P11465 335 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 RNFT1Q5M7Z0 435 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 PGLYRP3Q96LB9 341 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 SONP18583 2426 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 VSTM2LQ96N03 204 aa11.48□□□□□ -0.57
SYNGAP1-208ENST00000629380 IGHV5-51A0A0C4DH38 117 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 KRTCAP3Q53RY4 240 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 ZNF880Q6PDB4 577 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 CBLN2Q8IUK8 224 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 FFAR1O14842 300 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 RAE1P78406 368 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 ZNF658BQ4V348 819 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 DENND4CQ5VZ89 1909 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 IGHV3OR15-7A0A075B7D8 119 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 CCL21O00585 134 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 RBM11P57052 281 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 CX3CL1P78423 397 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 PSMG4Q5JS54 123 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 NCMAPQ5T1S8 102 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 OTPQ5XKR4 325 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 ZNF71Q9NQZ8 489 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 MMD2Q8IY49 270 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 TMEM190Q8WZ59 177 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 NPVFQ9HCQ7 196 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 IL36RNQ9UBH0 155 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 PEF1Q9UBV8 284 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 TYMSP04818 313 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 GVQW1Q8N7I0 195 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 PCGF1Q9BSM1 259 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 TRAV39A0A0B4J263 110 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 PRKNO60260 465 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 AGFG2O95081 481 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 PDCD1Q15116 288 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 C21orf62-AS1Q17RA5 79 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 ISXQ2M1V0 245 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 UNQ9370/PRO34162Q6UXP9 181 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 C17orf47Q8NEP4 570 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 MEGF10Q96KG7 1140 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 KIAA1549Q9HCM3 1950 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 WFIKKN1Q96NZ8 548 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 SOSTQ9BQB4 213 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 DCTN5Q9BTE1 182 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 RBMY1BA6NDE4 496 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 RBMY1EA6NEQ0 496 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 RBMY1DP0C7P1 496 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 RBMY1A1P0DJD3 496 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 RBMY1CP0DJD4 496 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 LEMD1Q68G75 181 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 ZNF414Q96IQ9 312 aa11.47□□□□□ -0.57
SYNGAP1-208ENST00000629380 OBSL1O75147 1896 aa11.46□□□□□ -0.57
SYNGAP1-208ENST00000629380 GFRA3O60609 400 aa11.46□□□□□ -0.57
SYNGAP1-208ENST00000629380 OR4D5Q8NGN0 318 aa11.46□□□□□ -0.57
SYNGAP1-208ENST00000629380 FNDC1Q4ZHG4 1894 aaPredicted RBP11.46□□□□□ -0.57
SYNGAP1-208ENST00000629380 WDR90Q96KV7 1748 aa11.46□□□□□ -0.57
SYNGAP1-208ENST00000629380 COL10A1Q03692 680 aa11.46□□□□□ -0.57
SYNGAP1-208ENST00000629380 PIGYQ3MUY2 71 aa11.46□□□□□ -0.57
SYNGAP1-208ENST00000629380 FGF11Q92914 225 aa11.46□□□□□ -0.57
SYNGAP1-208ENST00000629380 CCL19Q99731 98 aa11.46□□□□□ -0.57
SYNGAP1-208ENST00000629380 MALRD1Q5VYJ5 2156 aa11.46□□□□□ -0.57
SYNGAP1-208ENST00000629380 NDUFA2O43678 99 aa11.46□□□□□ -0.57
SYNGAP1-208ENST00000629380 HIST1H1AQ02539 215 aaPredicted RBP11.46□□□□□ -0.57
SYNGAP1-208ENST00000629380 LINC00862A6NCI5 91 aa11.46□□□□□ -0.57
SYNGAP1-208ENST00000629380 HSF4Q9ULV5 492 aa11.46□□□□□ -0.57
SYNGAP1-208ENST00000629380 C7orf66A4D0T2 115 aa11.46□□□□□ -0.58
SYNGAP1-208ENST00000629380 C9orf62Q8N4C0 152 aa11.46□□□□□ -0.58
SYNGAP1-208ENST00000629380 MRPL32Q9BYC8 188 aaKnown RBP11.46□□□□□ -0.58
SYNGAP1-208ENST00000629380 STPG1Q5TH74 334 aa11.46□□□□□ -0.58
SYNGAP1-208ENST00000629380 LIFP15018 202 aa11.46□□□□□ -0.58
SYNGAP1-208ENST00000629380 MMP16P51512 607 aa11.46□□□□□ -0.58
SYNGAP1-208ENST00000629380 ATP5IP56385 69 aaPredicted RBP11.46□□□□□ -0.58
SYNGAP1-208ENST00000629380 TMEM92Q6UXU6 159 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms