RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 OR10W1Q8NGF6 305 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR8B3Q8NGG8 313 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR1K1Q8NGR3 316 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 FLVCR1-AS1Q8TAF5 88 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 DPF1Q92782 380 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 TAF15Q92804 592 aaKnown RBP eCLIP3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 NINJ1Q92982 152 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 SFRP2Q96HF1 295 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 BMFQ96LC9 184 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 GUCD1Q96NT3 240 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR2V2Q96R30 315 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR8B2Q96RD0 313 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 ATP6V0BQ99437 205 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 SIGMAR1Q99720 223 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 SAMD10Q9BYL1 202 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 PATZ1Q9HBE1 687 aaKnown RBP3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 KCNIP2Q9NS61 270 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 PLEKHJ1Q9NW61 149 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 IL36GQ9NZH8 169 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 CD207Q9UJ71 328 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 MCTS1Q9ULC4 181 aaKnown RBP3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 MMP17Q9ULZ9 603 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 UBE2J1Q9Y385 318 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 PPIAL4AQ9Y536 164 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 NCOA6Q14686 2063 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 A0A1W2PP11 408 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF850A8MQ14 1090 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 C17orf105B2RV13 164 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 B4DGG1 531 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 C9JCJ5 164 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 H0Y980 276 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 MS4A18H0YCH9 400 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 H3BRM9 83 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 H3BSH0 61 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 H7C1C5 153 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 IFNL4K9M1U5 179 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF324O75467 553 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 VAMP5O95183 116 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 CA2P00918 260 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 PPYP01298 95 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 STAG3L3P0CL85 134 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 PPIAL4GP0DN37 164 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 PGCP20142 388 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 DRD1P21728 446 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 OMGP23515 440 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 CRYBB3P26998 211 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 OPRM1P35372 400 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 TIMP3P35625 211 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 GPR6P46095 362 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 ASCL1P50553 236 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 DAP3P51398 398 aaKnown RBP3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF83P51522 516 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 KRTDAPP60985 99 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 GRB2P62993 217 aaKnown RBP3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 CX3CL1P78423 397 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 PSG9Q00887 426 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 POU3F1Q03052 451 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 TLE3Q04726 772 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 SQSTM1Q13501 440 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM53BQ14153 422 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 PDGFRLQ15198 375 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 VWC2Q2TAL6 325 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 MS4A18Q3C1V0 323 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 TCTEX1D4Q5JR98 221 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 AMMECR1LQ6DCA0 310 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 FIGLAQ6QHK4 219 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 TMEM14EPQ6UXP3 125 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 MEX3BQ6ZN04 569 aaKnown RBP3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 RNF44Q7L0R7 432 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 RNF144BQ7Z419 303 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 C1QL2Q7Z5L3 287 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 TMEM25Q86YD3 366 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 SAXO1Q8IYX7 474 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR5A1Q8NGJ0 315 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR10G9Q8NGN4 311 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR2Y1Q8NGV0 311 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF596Q8TC21 504 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 DOK4Q8TEW6 326 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 WIPF2Q8TF74 440 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM222BQ8WU58 562 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 BORCS7Q96B45 105 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 KCNS1Q96KK3 526 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 Q96MF0 132 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 CLUHP3Q96NS8 147 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 FOXN4Q96NZ1 517 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR4C12Q96R67 309 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 GPER1Q99527 375 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 CLEC7AQ9BXN2 247 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 QTRT1Q9BXR0 403 aaKnown RBP3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 COMMD5Q9GZQ3 224 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 VSIRQ9H7M9 311 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZMAT4Q9H898 229 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 GNB4Q9HAV0 340 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF160Q9HCG1 818 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 TUBG2Q9NRH3 451 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 LANCL2Q9NS86 450 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 TAAR3PQ9P1P4 343 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 LHFPL6Q9Y693 200 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 ARL2-SNX15V9GYD0 113 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 CACNA1IQ9P0X4 2223 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms