RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 IGLV1-51P01701 117 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 ISG15P05161 165 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 IGFBP3P17936 291 aaPredicted RBP5.84□□□□□ -1.47
CCDC47-205ENST00000582331 PRKACBP22694 351 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 TALDO1P37837 337 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 GPR176Q14439 515 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 UBE2NLQ5JXB2 153 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 HACD4Q5VWC8 232 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 HAPLN4Q86UW8 402 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 TMEM104Q8NE00 496 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 OR51T1Q8NGJ9 327 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 RTN4IP1Q8WWV3 396 aaPredicted RBP5.84□□□□□ -1.47
CCDC47-205ENST00000582331 PP6455Q8WZ26 134 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 TMEM106AQ96A25 262 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 RFT1Q96AA3 541 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 FLYWCH2Q96CP2 140 aaKnown RBP5.84□□□□□ -1.47
CCDC47-205ENST00000582331 C10orf35Q96D05 121 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 FAM110AQ9BQ89 295 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 TOLLIPQ9H0E2 274 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 RHOFQ9HBH0 211 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 RETNQ9HD89 108 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 KIAA1456Q9P272 454 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 RABL2AQ9UBK7 228 aaPredicted RBP5.84□□□□□ -1.47
CCDC47-205ENST00000582331 KIF25Q9UIL4 384 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 RABL2BQ9UNT1 228 aa5.84□□□□□ -1.47
CCDC47-205ENST00000582331 TRAV41A0A0B4J266 112 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 A0A0B4J293 547 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 IGKV1-9A0A0C4DH69 117 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 HMX3A6NHT5 357 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 HSPB6O14558 160 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 ARPC1BO15143 372 aaKnown RBP5.83□□□□□ -1.48
CCDC47-205ENST00000582331 TPPPO94811 219 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 MAS1P04201 325 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 HSPB1P04792 205 aaKnown RBP5.83□□□□□ -1.48
CCDC47-205ENST00000582331 LGALS1P09382 135 aaKnown RBP5.83□□□□□ -1.48
CCDC47-205ENST00000582331 IL3RAP26951 378 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 CLDN12P56749 244 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 SCAND1P57086 179 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 PLA2G7Q13093 441 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 PAN3Q58A45 887 aaKnown RBP5.83□□□□□ -1.48
CCDC47-205ENST00000582331 MZT2BQ6NZ67 158 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 LINC00311Q8N616 119 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 MRGPRDQ8TDS7 321 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 SMIM4Q8WVI0 70 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 SPSB1Q96BD6 273 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 RSRP1Q9BUV0 290 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 HIPK2Q9H2X6 1198 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 PARP11Q9NR21 331 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 ETV7Q9Y603 341 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 DNAH10Q8IVF4 4471 aa5.83□□□□□ -1.48
CCDC47-205ENST00000582331 TRAV39A0A0B4J263 110 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 LOC107986453A0A1B0GWG9 222 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 H0Y980 276 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 SLC17A2O00624 439 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 ATP6V0E1O15342 81 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 SULT1B1O43704 296 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 CD3GP09693 182 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 TRAPPC2P0DI81 140 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 TRAPPC2BP0DI82 140 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 GZMHP20718 246 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 HLA-DMAP28067 261 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 BTCP35070 178 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 SSTR5P35346 364 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 KLF9Q13886 244 aaPredicted RBP5.82□□□□□ -1.48
CCDC47-205ENST00000582331 C1orf100Q5SVJ3 147 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 TMEM244Q5VVB8 128 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 ZNF57Q68EA5 555 aaPredicted RBP5.82□□□□□ -1.48
CCDC47-205ENST00000582331 UTS2BQ765I0 119 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 AKAP14Q86UN6 197 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 GTSCR1Q86UQ5 136 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 SAXO1Q8IYX7 474 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 C8orf31Q8N9H6 132 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 OR52M1Q8NGK5 317 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 OR5D18Q8NGL1 313 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 ENKURQ8TC29 256 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 GATAD1Q8WUU5 269 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 TSEN15Q8WW01 171 aaKnown RBP5.82□□□□□ -1.48
CCDC47-205ENST00000582331 FGGYQ96C11 551 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 ADAT3Q96EY9 351 aaPredicted RBP5.82□□□□□ -1.48
CCDC47-205ENST00000582331 ST6GAL2Q96JF0 529 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 MARVELD1Q9BSK0 173 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 ST6GALNAC5Q9BVH7 336 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 NEK6Q9HC98 313 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 TAS2R4Q9NYW5 299 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 STEAP1Q9UHE8 339 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 DHDHQ9UQ10 334 aa5.82□□□□□ -1.48
CCDC47-205ENST00000582331 MRPS7Q9Y2R9 242 aaKnown RBP5.82□□□□□ -1.48
CCDC47-205ENST00000582331 RBMX2Q9Y388 322 aaKnown RBP5.82□□□□□ -1.48
CCDC47-205ENST00000582331 TRAV24A0A0B4J272 114 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 FAM240BA0A1B0GVZ2 78 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 A0A1W2PN81 502 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 SDCBPO00560 298 aaPredicted RBP5.81□□□□□ -1.48
CCDC47-205ENST00000582331 TXNL1O43396 289 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 ORC5O43913 435 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 HLA-DRB1P01911 266 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 CD2P06729 351 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 UBCP0CG48 685 aaKnown RBP5.81□□□□□ -1.48
CCDC47-205ENST00000582331 BLVRBP30043 206 aaPredicted RBP5.81□□□□□ -1.48
CCDC47-205ENST00000582331 CHRNA7P36544 502 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 KCNJ3P48549 501 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms