RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	TNFSF12	O43508	249 aa		10.16	□□□□□ -0.78
SPG7-222	ENST00000569820	ZNF705D	P0CH99	300 aa	Predicted RBP	10.16	□□□□□ -0.78
SPG7-222	ENST00000569820	ZNF705B	P0CI00	300 aa	Predicted RBP	10.16	□□□□□ -0.78
SPG7-222	ENST00000569820	ARF1	P84077	181 aa	Known RBP	10.16	□□□□□ -0.78
SPG7-222	ENST00000569820	ZNF726P1	Q15940	193 aa		10.16	□□□□□ -0.78
SPG7-222	ENST00000569820	TBC1D26	Q86UD7	250 aa		10.16	□□□□□ -0.78
SPG7-222	ENST00000569820	SELENOH	Q8IZQ5	122 aa	Known RBP	10.16	□□□□□ -0.78
SPG7-222	ENST00000569820	APH1A	Q96BI3	265 aa		10.16	□□□□□ -0.78
SPG7-222	ENST00000569820	OR51I2	Q9H344	312 aa		10.16	□□□□□ -0.78
SPG7-222	ENST00000569820	VSIR	Q9H7M9	311 aa		10.16	□□□□□ -0.78
SPG7-222	ENST00000569820	KIAA2026	Q5HYC2	2103 aa		10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	CLEC18A	A5D8T8	446 aa		10.15	□□□□□ -0.78
SPG7-222	ENST00000569820		F6UZH7	168 aa		10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	SPRY1	O43609	319 aa	Predicted RBP	10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	KBTBD11	O94819	623 aa		10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	IGHG3	P01860	377 aa		10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	RPL23	P62829	140 aa	Known RBP	10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	TMEM183B	Q1AE95	376 aa		10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	SPIN3	Q5JUX0	258 aa		10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	C9orf135	Q5VTT2	229 aa		10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	FAM180A	Q6UWF9	173 aa		10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	MYPOP	Q86VE0	399 aa	Predicted RBP	10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	CISD2	Q8N5K1	135 aa	Known RBP	10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	CLEC18C	Q8NCF0	446 aa		10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	OR4C5	Q8NGB2	326 aa		10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	OR2T10	Q8NGZ9	312 aa		10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	OR2AE1	Q8NHA4	323 aa		10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	SCGB1C1	Q8TD33	95 aa		10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	OR6C3	Q9NZP0	311 aa		10.15	□□□□□ -0.78
SPG7-222	ENST00000569820	MED12L	Q86YW9	2145 aa		10.15	□□□□□ -0.79
SPG7-222	ENST00000569820		H3BP45	60 aa		10.15	□□□□□ -0.79
SPG7-222	ENST00000569820	VDAC1	P21796	283 aa		10.15	□□□□□ -0.79
SPG7-222	ENST00000569820	PRSS8	Q16651	343 aa		10.15	□□□□□ -0.79
SPG7-222	ENST00000569820	OCIAD2	Q56VL3	154 aa		10.15	□□□□□ -0.79
SPG7-222	ENST00000569820	NMS	Q5H8A3	153 aa		10.15	□□□□□ -0.79
SPG7-222	ENST00000569820	TEX43	Q6ZNM6	134 aa		10.15	□□□□□ -0.79
SPG7-222	ENST00000569820	CENPV	Q7Z7K6	275 aa	Predicted RBP	10.15	□□□□□ -0.79
SPG7-222	ENST00000569820	ZNF738	Q8NE65	137 aa		10.15	□□□□□ -0.79
SPG7-222	ENST00000569820	RPUSD4	Q96CM3	377 aa	Known RBP	10.15	□□□□□ -0.79
SPG7-222	ENST00000569820	MS4A10	Q96PG2	267 aa		10.15	□□□□□ -0.79
SPG7-222	ENST00000569820	RNF24	Q9Y225	148 aa		10.15	□□□□□ -0.79
SPG7-222	ENST00000569820	CHD3	Q12873	2000 aa	Known RBP	10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	TRAV17	A0A0B4J275	112 aa		10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	DUXB	A0A1W2PPF3	345 aa		10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	MAP1LC3B2	A6NCE7	125 aa		10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	SLC22A20	A6NK97	555 aa		10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	ZNF737	O75373	536 aa		10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	TYMS	P04818	313 aa		10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	OR5G3	P0C626	314 aa		10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	GNRHR	P30968	328 aa		10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	NPBWR2	P48146	333 aa		10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	PAX9	P55771	341 aa		10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	MORN2	Q502X0	79 aa		10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	MCEMP1	Q8IX19	187 aa		10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	PLPPR1	Q8TBJ4	325 aa		10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	ZCCHC14	Q8WYQ9	949 aa	Known RBP	10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	MAP1LC3B	Q9GZQ8	125 aa		10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	IL19	Q9UHD0	177 aa		10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	CUL9	Q8IWT3	2517 aa		10.14	□□□□□ -0.79
SPG7-222	ENST00000569820	SPEN	Q96T58	3664 aa	Known RBP	10.14	□□□□□ -0.79
SPG7-222	ENST00000569820		A0A096LPE4	126 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820		A0A1W2PPZ6	126 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	ZNF503-AS2	A6NEH8	195 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	WISP2	O76076	250 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	MDH2	P40926	338 aa	Known RBP	10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	MEF2B	Q02080	365 aa	Predicted RBP	10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	TMEM267	Q0VDI3	215 aa	Predicted RBP	10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	PRSS57	Q6UWY2	283 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	C10orf35	Q96D05	121 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	SDSL	Q96GA7	329 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	CIB3	Q96Q77	187 aa	Predicted RBP	10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	PRDM14	Q9GZV8	571 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	RNF115	Q9Y4L5	304 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	RBM7	Q9Y580	266 aa	Known RBP	10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	PRRC2C	Q9Y520	2896 aa	Known RBP	10.13	□□□□□ -0.79
SPG7-222	ENST00000569820		J3QW42	95 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820		M0QZ24	198 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	ZNF92	Q03936	586 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	PIGY	Q3MUY2	71 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	ACSF3	Q4G176	576 aa	Predicted RBP	10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	FBLN7	Q53RD9	439 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	VWA1	Q6PCB0	445 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	SPSB1	Q96BD6	273 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	ANAPC16	Q96DE5	110 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	PSMG3	Q9BT73	122 aa	Predicted RBP	10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	COX11	Q9Y6N1	276 aa		10.13	□□□□□ -0.79
SPG7-222	ENST00000569820	WDR1	O75083	606 aa		10.12	□□□□□ -0.79
SPG7-222	ENST00000569820	SRP14	P37108	136 aa	Known RBP	10.12	□□□□□ -0.79
SPG7-222	ENST00000569820	PRSS12	P56730	875 aa		10.12	□□□□□ -0.79
SPG7-222	ENST00000569820	NHLH1	Q02575	133 aa		10.12	□□□□□ -0.79
SPG7-222	ENST00000569820	OR8B8	Q15620	311 aa		10.12	□□□□□ -0.79
SPG7-222	ENST00000569820	KCNIP4	Q6PIL6	250 aa		10.12	□□□□□ -0.79
SPG7-222	ENST00000569820	LRP11	Q86VZ4	500 aa		10.12	□□□□□ -0.79
SPG7-222	ENST00000569820	IMMP2L	Q96T52	175 aa		10.12	□□□□□ -0.79
SPG7-222	ENST00000569820	C12orf49	Q9H741	205 aa		10.12	□□□□□ -0.79
SPG7-222	ENST00000569820	GP6	Q9HCN6	339 aa		10.12	□□□□□ -0.79
SPG7-222	ENST00000569820	CLCF1	Q9UBD9	225 aa		10.12	□□□□□ -0.79
SPG7-222	ENST00000569820	TRAV30	A0A087WSZ9	112 aa		10.12	□□□□□ -0.79
SPG7-222	ENST00000569820	TMEM41B	Q5BJD5	291 aa		10.12	□□□□□ -0.79
SPG7-222	ENST00000569820	TOMM20L	Q6UXN7	152 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms