RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 ATP6V1FQ16864 119 aa17.69■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 LRRC75BQ2VPJ9 315 aa17.69■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 PRR30Q53SZ7 412 aaPredicted RBP17.69■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 NCR3LG1Q68D85 454 aa17.69■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.69■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 R3HDM4Q96D70 268 aa17.69■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 VKORC1Q9BQB6 163 aa17.69■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 EGLN1Q9GZT9 426 aa17.69■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 GFOD1Q9NXC2 390 aa17.69■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 PRELID3BQ9Y3B1 194 aa17.69■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 FBXO7Q9Y3I1 522 aa17.69■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 MARCH11A6NNE9 402 aa17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 PPIHO43447 177 aaKnown RBP17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 SLC38A11Q08AI6 406 aa17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 ARL16Q0P5N6 197 aa17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 C17orf58Q2M2W7 97 aa17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 KDF1Q8NAX2 398 aaPredicted RBP17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 DEFB108BQ8NET1 73 aa17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 DTD1Q8TEA8 209 aa17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 RBMXL1Q96E39 390 aaKnown RBP17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 IFI27L2Q9H2X8 130 aa17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 KIAA1456Q9P272 454 aa17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 MED19A0JLT2 244 aaPredicted RBP17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 ZNF729A6NN14 1252 aaPredicted RBP17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 FCGR3BO75015 233 aa17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 RBMXL2O75526 392 aaKnown RBP17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 F12P00748 615 aaPredicted RBP17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 FAM87AP0C7U9 286 aa17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 SERF2P84101 59 aa17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 SPSB3Q6PJ21 355 aa17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 ABHD14AQ9BUJ0 271 aa17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 SLC35B3Q9H1N7 401 aa17.68■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 GYPAP02724 150 aa17.67■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 SELLP14151 372 aa17.67■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 ERVK-16P61578 105 aa17.67■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 CORO2AQ92828 525 aa17.67■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 S1PR3Q99500 378 aa17.67■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 CCL13Q99616 98 aa17.67■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 TRAV1-1A0A0B4J248 108 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 RBFOX3A6NFN3 312 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 CASP6P55212 293 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 C1orf87Q8N0U7 546 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 WDR61Q9GZS3 305 aaKnown RBP17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 LINC00574Q9H8X3 128 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 IDI2-AS1Q9NZ38 188 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 TRAV38-1A0A0B4J264 116 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 A0A1B0GV50 99 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 CEBPZOSA8MTT3 80 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 GPR37O15354 613 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 GFRA3O60609 400 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 PROP1O75360 226 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 CCL8P80075 99 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 AARDQ4LEZ3 155 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 SFT2D1Q8WV19 159 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 PINX1Q96BK5 328 aaKnown RBP17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 PLPPR2Q96GM1 343 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 OR4C12Q96R67 309 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 TIMM9Q9Y5J7 89 aa17.66■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 ZNF134P52741 427 aa17.65■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 TMEM88Q6PEY1 159 aa17.65■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 ADTRPQ96IZ2 230 aa17.65■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 WFIKKN1Q96NZ8 548 aa17.65■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 TMEM147Q9BVK8 224 aa17.65■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 UNKLQ9H9P5 680 aaKnown RBP17.65■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 hADV38S2A0JD32 116 aa17.64■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 NHLH1Q02575 133 aa17.64■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 TLE1Q04724 770 aa17.64■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 RPL39P5Q59GN2 51 aa17.64■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 SP5Q6BEB4 398 aaPredicted RBP17.64■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 OR8G2PQ6IF36 304 aa17.64■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 FAM216BQ8N7L0 139 aa17.64■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 OR4S2Q8NH73 311 aa17.64■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 TAF15Q92804 592 aaKnown RBP eCLIP17.64■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 CLCC1Q96S66 551 aa17.64■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 RSG1Q9BU20 258 aa17.64■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 NDRG3Q9UGV2 375 aa17.64■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 ZG16O60844 167 aa17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 NQO2P16083 231 aa17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 THBS3P49746 956 aa17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 LINC00205P59089 165 aa17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 CCL20P78556 96 aa17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 PRAMEF5Q5TYX0 476 aa17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 ADAM5Q6NVV9 412 aa17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 CBLN2Q8IUK8 224 aa17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 OR10P1Q8NGE3 313 aa17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 OR4A16Q8NH70 328 aa17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 SAP30LQ9HAJ7 183 aa17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 RPP30P78346 268 aaKnown RBP17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 MEF2CQ06413 473 aaPredicted RBP17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 CT45A1Q5HYN5 189 aa17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 DUX4L9Q6RFH8 374 aaPredicted RBP17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 OR52E5Q8NH55 327 aa17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 CT45A3Q8NHU0 189 aa17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 ASPMQ8IZT6 3477 aa17.63■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 UBE2L5PA0A1B0GUS4 154 aa17.62■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 SLC31A2O15432 143 aa17.62■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 SPCS3P61009 180 aa17.62■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 TMEM41BQ5BJD5 291 aa17.62■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 OR10A7Q8NGE5 316 aa17.62■□□□□ 0.41
VPS9D1-AS1-202ENST00000562866 DDB2Q92466 427 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms