RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 UBE2L5PA0A1B0GUS4 154 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 ZNF729A6NN14 1252 aaPredicted RBP9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 F6UZH7 168 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 RPL36A-HNRNPH2H7BZ11 118 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 DVL1O14640 695 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 ST8SIA5O15466 376 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 NDUFA2O43678 99 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 RNF224P0DH78 156 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 DYNLT3P51808 116 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 ERHP84090 104 aaKnown RBP9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 EWSR1Q01844 656 aaKnown RBP eCLIP9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 LIAT1Q6ZQX7 453 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 OR5P3Q8WZ94 311 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 INSIG2Q9Y5U4 225 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 CLEC18AA5D8T8 446 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 B4DEV8 164 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 HRASP01112 189 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 FBP1P09467 338 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 PLA2G5P39877 138 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 FHITP49789 147 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 P2RY4P51582 365 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 ARF6P62330 175 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 ANKRD55Q3KP44 614 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 ZNF474Q6S9Z5 364 aaPredicted RBP9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 CLEC18CQ8NCF0 446 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 RSPO3Q9BXY4 272 aaPredicted RBP9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 IL36GQ9NZH8 169 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 TP53BP1Q12888 1972 aaPredicted RBP9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 OR8U8P0C7N1 319 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 HKR1P10072 659 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 BRS3P32247 399 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 PPP1CCP36873 323 aaKnown RBP9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 TGIF2LYQ8IUE0 185 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 TGIF2LXQ8IUE1 241 aa9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 AMMECR1Q9Y4X0 333 aaPredicted RBP9.06□□□□□ -0.96
CARMIL3-202ENST00000559694 A0A1B0GTI1 187 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 H0YL77 283 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 ZNF737O75373 536 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 PDLIM4P50479 330 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 VAX1Q5SQQ9 334 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 ZNRF1Q8ND25 227 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 OR10S1Q8NGN2 331 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 WBP1Q96G27 269 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 MRPL37Q9BZE1 423 aaKnown RBP9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 TMEM106BQ9NUM4 274 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 ZNF319Q9P2F9 582 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 AUP1Q9Y679 476 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 C17orf100A8MU93 164 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 PRR32B1ATL7 298 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 RHBDL1O75783 438 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 LY6G6FQ5SQ64 297 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 LRP11Q86VZ4 500 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 OR2T10Q8NGZ9 312 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 PIMREGQ9BSJ6 248 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 GNB4Q9HAV0 340 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 SLC2A9Q9NRM0 540 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 SLC35D1Q9NTN3 355 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 FUT9Q9Y231 359 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 C20orf202A1L168 122 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 IFNL4K9M1U5 179 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 REG1BP48304 166 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 GAMTQ14353 236 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 C5orf66Q9H5L9 145 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 CCL28Q9NRJ3 127 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 FKBP11Q9NYL4 201 aa9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 MKI67P46013 3256 aaKnown RBP9.05□□□□□ -0.96
CARMIL3-202ENST00000559694 TRAV34A0A0B4J273 112 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 PPYP01298 95 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 DTYMKP23919 212 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 HNRNPA3P51991 378 aaKnown RBP9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 COTL1Q14019 142 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 C1QL2Q7Z5L3 287 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 LINC00596Q86U02 117 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 CALHM1Q8IU99 346 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 BSCL2Q96G97 398 aaPredicted RBP9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 ZNF714Q96N38 554 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 SMDT1Q9H4I9 107 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 CCDC168Q8NDH2 2452 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 A0A087WV48 116 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 ODAMA1E959 279 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 CHST1O43916 411 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 DEDDO75618 318 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 ETFRF1Q6IPR1 90 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 AQP3Q92482 292 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 ERGIC1Q969X5 290 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 TGIF2-C20orf24A0A0A6YYL0 155 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 F2RL2O00254 374 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 ADH4P08319 380 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 TMEM183BQ1AE95 376 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 FAM78BQ5VT40 261 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 NABP1Q96AH0 204 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 NOL4LQ96MY1 436 aaPredicted RBP9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 BARX1Q9HBU1 254 aaPredicted RBP9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 Q9N2K0 584 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 DOCK10Q96BY6 2186 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 LYNX1G3V0Z9 82 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 H0Y8G0 127 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 PGA5P0DJD9 388 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 LYNX1P0DP58 116 aa9.04□□□□□ -0.96
CARMIL3-202ENST00000559694 MMP9P14780 707 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms