RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 EBI3Q14213 229 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 GNMTQ14749 295 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 FCN2Q15485 313 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 MORN2Q502X0 79 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 CT45A1Q5HYN5 189 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 LY6G6FQ5SQ64 297 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 ZNF880Q6PDB4 577 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 MOB3BQ86TA1 216 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 TGIF2LXQ8IUE1 241 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 C11orf44Q8N8P7 122 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 CT45A3Q8NHU0 189 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 FYTTD1Q96QD9 318 aaKnown RBP10.4□□□□□ -0.74
SHMT2-211ENST00000554310 MGAT4AQ9UM21 535 aa10.4□□□□□ -0.74
SHMT2-211ENST00000554310 MEIS3P1A6NDR6 274 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 TMEM235A6NFC5 223 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 SNRPGP15A8MWD9 76 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 ARPC1BO15143 372 aaKnown RBP10.39□□□□□ -0.75
SHMT2-211ENST00000554310 YPEL1O60688 119 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 RAB3DO95716 219 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 SULT1A3P0DMM9 295 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 SULT1A4P0DMN0 295 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 CD1BP29016 333 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 PPP1CCP36873 323 aaKnown RBP10.39□□□□□ -0.75
SHMT2-211ENST00000554310 VEGFCP49767 419 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 ZNF134P52741 427 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 NKX2-5P52952 324 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-211ENST00000554310 MEF2DQ14814 521 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 PNLIPRP3Q17RR3 467 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 CDNFQ49AH0 187 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 FAAP20Q6NZ36 180 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 GLDNQ6ZMI3 551 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-211ENST00000554310 NDUFA11Q86Y39 141 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 C5orf56Q8N8D9 126 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 OR2AK2Q8NG84 335 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 OR52L2PQ8NGH6 319 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 OR2T10Q8NGZ9 312 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 YPEL2Q96QA6 119 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 GPN1Q9HCN4 374 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-211ENST00000554310 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.39□□□□□ -0.75
SHMT2-211ENST00000554310 AK3Q9UIJ7 227 aa10.39□□□□□ -0.75
SHMT2-211ENST00000554310 PAIP2BQ9ULR5 123 aaKnown RBP10.39□□□□□ -0.75
SHMT2-211ENST00000554310 CD3DP04234 171 aa10.38□□□□□ -0.75
SHMT2-211ENST00000554310 CD28P10747 220 aa10.38□□□□□ -0.75
SHMT2-211ENST00000554310 TBPP20226 339 aa10.38□□□□□ -0.75
SHMT2-211ENST00000554310 ARL6IP1Q15041 203 aa10.38□□□□□ -0.75
SHMT2-211ENST00000554310 C9orf152Q5JTZ5 239 aa10.38□□□□□ -0.75
SHMT2-211ENST00000554310 Q6ZPA2 131 aa10.38□□□□□ -0.75
SHMT2-211ENST00000554310 LYG1Q8N1E2 194 aa10.38□□□□□ -0.75
SHMT2-211ENST00000554310 Q8N6K4 173 aa10.38□□□□□ -0.75
SHMT2-211ENST00000554310 OR11H7Q8NGC8 314 aa10.38□□□□□ -0.75
SHMT2-211ENST00000554310 OR8H1Q8NGG4 311 aa10.38□□□□□ -0.75
SHMT2-211ENST00000554310 IL1F10Q8WWZ1 152 aa10.38□□□□□ -0.75
SHMT2-211ENST00000554310 ARHGAP5-AS1Q96IT6 56 aa10.38□□□□□ -0.75
SHMT2-211ENST00000554310 EAF1Q96JC9 268 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-211ENST00000554310 SLC25A21Q9BQT8 299 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-211ENST00000554310 GINS4Q9BRT9 223 aa10.38□□□□□ -0.75
SHMT2-211ENST00000554310 PECRQ9BY49 303 aa10.38□□□□□ -0.75
SHMT2-211ENST00000554310 ANAPC10Q9UM13 185 aa10.38□□□□□ -0.75
SHMT2-211ENST00000554310 FLVCR2Q9UPI3 526 aa10.38□□□□□ -0.75
SHMT2-211ENST00000554310 CMYA5Q8N3K9 4069 aa10.38□□□□□ -0.75
SHMT2-211ENST00000554310 IGHV3-72A0A0B4J1Y9 119 aa10.37□□□□□ -0.75
SHMT2-211ENST00000554310 SH2D7A6NKC9 451 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-211ENST00000554310 ZNF736B4DX44 427 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-211ENST00000554310 MOSP00540 346 aa10.37□□□□□ -0.75
SHMT2-211ENST00000554310 ZNF735P0CB33 412 aa10.37□□□□□ -0.75
SHMT2-211ENST00000554310 ANXA3P12429 323 aa10.37□□□□□ -0.75
SHMT2-211ENST00000554310 HIST1H1DP16402 221 aaKnown RBP10.37□□□□□ -0.75
SHMT2-211ENST00000554310 TMEM50BP56557 158 aa10.37□□□□□ -0.75
SHMT2-211ENST00000554310 HLA-DRB3P79483 266 aa10.37□□□□□ -0.75
SHMT2-211ENST00000554310 MRPS15P82914 257 aaKnown RBP10.37□□□□□ -0.75
SHMT2-211ENST00000554310 HNF4GQ14541 408 aa10.37□□□□□ -0.75
SHMT2-211ENST00000554310 PLAC9Q5JTB6 97 aa10.37□□□□□ -0.75
SHMT2-211ENST00000554310 FAM71F2Q6NXP2 309 aa10.37□□□□□ -0.75
SHMT2-211ENST00000554310 OR5AU1Q8NGC0 362 aa10.37□□□□□ -0.75
SHMT2-211ENST00000554310 OR4X2Q8NGF9 303 aa10.37□□□□□ -0.75
SHMT2-211ENST00000554310 OR4D10Q8NGI6 311 aa10.37□□□□□ -0.75
SHMT2-211ENST00000554310 OR51S1Q8NGJ8 323 aa10.37□□□□□ -0.75
SHMT2-211ENST00000554310 FAM110DQ8TAY7 271 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-211ENST00000554310 RAB3CQ96E17 227 aa10.37□□□□□ -0.75
SHMT2-211ENST00000554310 CITED2Q99967 270 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-211ENST00000554310 CMSS1Q9BQ75 279 aaKnown RBP10.37□□□□□ -0.75
SHMT2-211ENST00000554310 HDHD3Q9BSH5 251 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-211ENST00000554310 ALX4Q9H161 411 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-211ENST00000554310 IFI27L2Q9H2X8 130 aa10.37□□□□□ -0.75
SHMT2-211ENST00000554310 LIN7CQ9NUP9 197 aaKnown RBP10.37□□□□□ -0.75
SHMT2-211ENST00000554310 SLC2A8Q9NY64 477 aa10.37□□□□□ -0.75
SHMT2-211ENST00000554310 SAA2-SAA4A0A096LPE2 208 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 DISC1C4P0D8 188 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 MFNGO00587 321 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 SSNA1O43805 119 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 SSX5O60225 188 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 OPN1MWP04001 364 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 SAA2P0DJI9 122 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-211ENST00000554310 OPN1MW2P0DN77 364 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 OPN1MW3P0DN78 364 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 GNB3P16520 340 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 NAT1P18440 290 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 CBX5P45973 191 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 GNG2P59768 71 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 CDK10Q15131 360 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms