RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PTX4Q96A99 478 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 CALYQ9NYX4 217 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 ZNF107Q9UII5 783 aaPredicted RBP5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 ST6GALNAC2Q9UJ37 374 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 WASHC3Q9Y3C0 194 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 HTN1P15515 57 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 ERVFC1-1P60608 527 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 CKS1BP61024 79 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 ASPHD2Q6ICH7 369 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 PCSK4Q6UW60 755 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 WFDC3Q8IUB2 231 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 HDHD3Q9BSH5 251 aaPredicted RBP5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 MAP1LC3B2A6NCE7 125 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 M0R143 59 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 GCM2O75603 506 aaPredicted RBP5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 HPRT1P00492 218 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 ZNF273Q14593 569 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 PDPNQ86YL7 162 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 OR9G1Q8NH87 305 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 WDYHV1Q96HA8 205 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 ATP5SQ99766 215 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 KLHDC3Q9BQ90 382 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 MAP1LC3BQ9GZQ8 125 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 PLSCR3Q9NRY6 295 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 BEX4Q9NWD9 120 aaPredicted RBP5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 VSIG4Q9Y279 399 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 MRPS18CQ9Y3D5 142 aaKnown RBP5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 LCTP09848 1927 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM90A10PA6NDY2 464 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM90A18PA6NE21 464 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM90A16PA6NEW6 464 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM90A20PA6NIJ5 464 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM90A8PA6NJQ4 464 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM90A7PA6NKC0 464 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM90A22PA8MWA6 464 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM90A12PA8MX19 464 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM90A5PA8MXJ8 464 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM90A23PA8MXZ1 464 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 FCGR3AP08637 254 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM90A15PP0C7V4 464 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM90A13PP0C7W8 464 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM90A14PP0C7W9 464 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM90A24PP0C7X0 464 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 MUC1P15941 1255 aaPredicted RBP5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 PLP1P60201 277 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 EGR4Q05215 589 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 GUCA2BQ16661 112 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 UNQ5815/PRO19632Q6UWF5 114 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 MMD2Q8IY49 270 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 WFDC6Q9BQY6 131 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 CLEC7AQ9BXN2 247 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 TMEM106BQ9NUM4 274 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 METTL1Q9UBP6 276 aaKnown RBP5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 PATJQ8NI35 1801 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 NKX2-6A6NCS4 301 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 ITGB1BP1O14713 200 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 RAMP1O60894 148 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 RBPMS2Q6ZRY4 209 aaKnown RBP5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 HOGA1Q86XE5 327 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 ABHD12Q8N2K0 398 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 RFLNBQ8N5W9 214 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 ZNF502Q8TBZ5 544 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 ZNF418Q8TF45 676 aaPredicted RBP5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 TMEM54Q969K7 222 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 ABHD14BQ96IU4 210 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 DCTN5Q9BTE1 182 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 IDI2-AS1Q9NZ38 188 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 MTCL1Q9Y4B5 1905 aaKnown RBP5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 IGHV3OR16-10A0A075B7F0 116 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 ZG16O60844 167 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 MPC2O95563 127 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 ISG15P05161 165 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 MMP7P09237 267 aaPredicted RBP5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 ID1P41134 155 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 PTGDSP41222 190 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 GZMKP49863 264 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 PRSS54Q6PEW0 395 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 CALHM1Q8IU99 346 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 OR10G4Q8NGN3 311 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 OR10G9Q8NGN4 311 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 OR10G7Q8NGN6 311 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 RNASE8Q8TDE3 154 aaKnown RBP5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 SNRNP40Q96DI7 357 aaKnown RBP5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 STARD4Q96DR4 205 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 C14orf79Q96F83 325 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 NPAS1Q99742 590 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 RALGAPA2Q2PPJ7 1873 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 GGCTO75223 188 aaKnown RBP5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 ACAA1P09110 424 aaPredicted RBP5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 LINC00271P0C7V0 271 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 SELLP14151 372 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 TMEM91Q6ZNR0 172 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 FADS6Q8N9I5 356 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 ZNF479Q96JC4 524 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 TECRQ9NZ01 308 aaKnown RBP5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 OR51B2Q9Y5P1 312 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 RALGAPA1Q6GYQ0 2036 aa5.91□□□□□ -1.46
SRGAP1-206ENST00000543397 PSG2P11465 335 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 NHLH2Q02577 135 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms