RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 MS4A10Q96PG2 267 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 MANBALQ9NQG1 85 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 KNTC1P50748 2209 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 SLC17A3O00476 420 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 GCGP01275 180 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 EPHA8P29322 1005 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-202ENST00000524773 TFPI2P48307 235 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 TOMM20LQ6UXN7 152 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 WDR86Q86TI4 376 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 Q8NFD4 153 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 LOC102723996A0A087X1L8 192 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 WNT9BO14905 357 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 CFIP05156 583 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 ADMP35318 185 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 SGMS2Q8NHU3 365 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 PINX1Q96BK5 328 aaKnown RBP11.07□□□□□ -0.64
CAPN1-202ENST00000524773 NPCDR1Q9BY65 106 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 HIPK2Q9H2X6 1198 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 TRBV20OR9-2A0A075B6H5 130 aa11.06□□□□□ -0.64
CAPN1-202ENST00000524773 CTXND1A0A1B0GTU2 59 aa11.06□□□□□ -0.64
CAPN1-202ENST00000524773 MT-CO3P00414 261 aa11.06□□□□□ -0.64
CAPN1-202ENST00000524773 CELA3BP08861 270 aa11.06□□□□□ -0.64
CAPN1-202ENST00000524773 HOXA6P31267 233 aa11.06□□□□□ -0.64
CAPN1-202ENST00000524773 OR3A1P47881 315 aa11.06□□□□□ -0.64
CAPN1-202ENST00000524773 IQCJQ1A5X6 159 aa11.06□□□□□ -0.64
CAPN1-202ENST00000524773 ZNF826PQ6ZT77 177 aa11.06□□□□□ -0.64
CAPN1-202ENST00000524773 LINC01551Q86U37 167 aa11.06□□□□□ -0.64
CAPN1-202ENST00000524773 VKORC1L1Q8N0U8 176 aa11.06□□□□□ -0.64
CAPN1-202ENST00000524773 NAGKQ9UJ70 344 aa11.06□□□□□ -0.64
CAPN1-202ENST00000524773 ANKRD30BLA7E2S9 258 aa11.06□□□□□ -0.64
CAPN1-202ENST00000524773 TGOLN2O43493 480 aa11.06□□□□□ -0.64
CAPN1-202ENST00000524773 BRWD1-AS2P59051 145 aa11.06□□□□□ -0.64
CAPN1-202ENST00000524773 PRR31Q5SQ13 230 aa11.06□□□□□ -0.64
CAPN1-202ENST00000524773 TMEM14EPQ6UXP3 125 aa11.06□□□□□ -0.64
CAPN1-202ENST00000524773 NEIL1Q96FI4 390 aaPredicted RBP11.06□□□□□ -0.64
CAPN1-202ENST00000524773 FAM103A1Q9BTL3 118 aaKnown RBP11.06□□□□□ -0.64
CAPN1-202ENST00000524773 ICE1Q9Y2F5 2266 aa11.06□□□□□ -0.64
CAPN1-202ENST00000524773 IRF2P14316 349 aa11.05□□□□□ -0.64
CAPN1-202ENST00000524773 SLC35B1P78383 322 aa11.05□□□□□ -0.64
CAPN1-202ENST00000524773 COA6Q5JTJ3 125 aaKnown RBP11.05□□□□□ -0.64
CAPN1-202ENST00000524773 Q6P435 159 aa11.05□□□□□ -0.64
CAPN1-202ENST00000524773 LSM10Q969L4 123 aaKnown RBP11.05□□□□□ -0.64
CAPN1-202ENST00000524773 DCTN5Q9BTE1 182 aa11.05□□□□□ -0.64
CAPN1-202ENST00000524773 RNF114Q9Y508 228 aa11.05□□□□□ -0.64
CAPN1-202ENST00000524773 GPR179Q6PRD1 2367 aa11.05□□□□□ -0.64
CAPN1-202ENST00000524773 PSPNO60542 156 aa11.05□□□□□ -0.64
CAPN1-202ENST00000524773 TDGF1P3P51864 188 aa11.05□□□□□ -0.64
CAPN1-202ENST00000524773 AESQ08117 197 aa11.05□□□□□ -0.64
CAPN1-202ENST00000524773 DNLZQ5SXM8 178 aa11.05□□□□□ -0.64
CAPN1-202ENST00000524773 NUFIP2Q7Z417 695 aaKnown RBP11.05□□□□□ -0.64
CAPN1-202ENST00000524773 SAP25Q8TEE9 199 aa11.05□□□□□ -0.64
CAPN1-202ENST00000524773 APOBEC3DQ96AK3 386 aaPredicted RBP11.05□□□□□ -0.64
CAPN1-202ENST00000524773 ACY3Q96HD9 319 aa11.05□□□□□ -0.64
CAPN1-202ENST00000524773 TMEM68Q96MH6 324 aa11.05□□□□□ -0.64
CAPN1-202ENST00000524773 AGMATQ9BSE5 352 aa11.05□□□□□ -0.64
CAPN1-202ENST00000524773 FAM90A10PA6NDY2 464 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 FAM90A18PA6NE21 464 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 FAM90A16PA6NEW6 464 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 FAM90A20PA6NIJ5 464 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 FAM90A8PA6NJQ4 464 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 FAM90A7PA6NKC0 464 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 FAM90A22PA8MWA6 464 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 FAM90A12PA8MX19 464 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 FAM90A5PA8MXJ8 464 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 FAM90A23PA8MXZ1 464 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 M0R143 59 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 DNPH1O43598 174 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 GGCTO75223 188 aaKnown RBP11.04□□□□□ -0.64
CAPN1-202ENST00000524773 FAM90A15PP0C7V4 464 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 FAM90A13PP0C7W8 464 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 FAM90A14PP0C7W9 464 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 FAM90A24PP0C7X0 464 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 SLC25A6P12236 298 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 PDLIM4P50479 330 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 ERVFC1-1P60608 527 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 HLA-DRB5Q30154 266 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 TGIF2LYQ8IUE0 185 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 OR10P1Q8NGE3 313 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 OR2Y1Q8NGV0 311 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 DTD1Q8TEA8 209 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 TECTBQ96PL2 329 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 DUSP23Q9BVJ7 150 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 LIN7CQ9NUP9 197 aaKnown RBP11.04□□□□□ -0.64
CAPN1-202ENST00000524773 HPRT1P00492 218 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 RPL15P61313 204 aaKnown RBP11.04□□□□□ -0.64
CAPN1-202ENST00000524773 RIPPLY2Q5TAB7 128 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 Q6ZWC4 215 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 ZNF709Q8N972 641 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 BEND2Q8NDZ0 799 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 VN1R17PQ8TDU5 208 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 POM121L2Q96KW2 1035 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 WDR54Q9H977 334 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 TP53TG3Q9ULZ0 132 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 SCO2A0A1W2PP80 73 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.04□□□□□ -0.64
CAPN1-202ENST00000524773 NXPH2O95156 264 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 CD82P27701 267 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 FOLR3P41439 243 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 MAGEA5P43359 124 aa11.04□□□□□ -0.64
CAPN1-202ENST00000524773 CDC34P49427 236 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms