RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 PDZD9Q8IXQ8 264 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 ABHD12Q8N2K0 398 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 PNKDQ8N490 385 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 OR10X1Q8NGY0 326 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 SECTM1Q8WVN6 248 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 SSMEM1Q8WWF3 244 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 GIMAP1Q8WWP7 306 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 TAF15Q92804 592 aaKnown RBP eCLIP9.82□□□□□ -0.84
UPF3A-210ENST00000493727 LHX4Q969G2 390 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 MOB3AQ96BX8 217 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 PARP12Q9H0J9 701 aaKnown RBP9.82□□□□□ -0.84
UPF3A-210ENST00000493727 FXYD6Q9H0Q3 95 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 DPAGT1Q9H3H5 408 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 SLC2A8Q9NY64 477 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 PSG11Q9UQ72 335 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 IGHV2-26A0A0B4J1V2 119 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 TUSC2O75896 110 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 OR8U9P0C7N5 309 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 MMP9P14780 707 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 IL3RAP26951 378 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 GPR12P47775 334 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 CCR6P51684 374 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 PRRX1P54821 245 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 RAG2P55895 527 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 RBMS2Q15434 407 aaKnown RBP9.81□□□□□ -0.84
UPF3A-210ENST00000493727 RGS21Q2M5E4 152 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 Q3ZCU0 254 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 DHRS11Q6UWP2 260 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 LCNL1Q6ZST4 164 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 C11orf42Q8N5U0 333 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 OR8U1Q8NH10 309 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 OR9G1Q8NH87 305 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 TERB2Q8NHR7 220 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 ZNF596Q8TC21 504 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 SCGB3A2Q96PL1 93 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 TBX15Q96SF7 602 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 SLC5A7Q9GZV3 580 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 OR2D2Q9H210 308 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 ZNF221Q9UK13 617 aa9.81□□□□□ -0.84
UPF3A-210ENST00000493727 SOX21Q9Y651 276 aaPredicted RBP9.81□□□□□ -0.84
UPF3A-210ENST00000493727 A0A087X0M5 115 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 IGHV1-69DA0A0B4J2H0 117 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 CENPVL3A0A0U1RRI6 287 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 A0A1B0GX30 115 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 A0A1W2PRD5 423 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 A0A1W2PRF3 423 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 A0A1W2PRM7 423 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 OR5H14A6NHG9 310 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 J3QR06 171 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 HSD17B6O14756 317 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 TIMM23O14925 209 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 SLC31A2O15432 143 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 IGHV1-69P01742 117 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 ARG1P05089 322 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 CD34P28906 385 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 S100GP29377 79 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 ABCA11PQ4W5N1 156 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 RUSC1-AS1Q66K80 236 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 ZNF660Q6AZW8 331 aaPredicted RBP9.8□□□□□ -0.84
UPF3A-210ENST00000493727 LHFPL1Q86WI0 220 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 SLC38A6Q8IZM9 456 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 LYG1Q8N1E2 194 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 SLC25A21Q9BQT8 299 aaPredicted RBP9.8□□□□□ -0.84
UPF3A-210ENST00000493727 CHIAQ9BZP6 476 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 TOLLIPQ9H0E2 274 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 MMP28Q9H239 520 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 RNF150Q9ULK6 438 aa9.8□□□□□ -0.84
UPF3A-210ENST00000493727 C14orf166Q9Y224 244 aaKnown RBP9.8□□□□□ -0.84
UPF3A-210ENST00000493727 AMMECR1Q9Y4X0 333 aaPredicted RBP9.8□□□□□ -0.84
UPF3A-210ENST00000493727 IGKV1D-13A0A0B4J2D9 117 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 CLPSL1A2RUU4 121 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 RNASEK-C17orf49H0YIS7 233 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 ITGB1BP1O14713 200 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 PTTG1O95997 202 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 RLN1P04808 185 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 IGKV1-13P0DP09 117 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 BTCP35070 178 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 LGALS4P56470 323 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 KRTAP19-4Q3LI73 84 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 CT45A1Q5HYN5 189 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 LY6G6FQ5SQ64 297 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 UTF1Q5T230 341 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 AADACL3Q5VUY0 350 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 LPCAT3Q6P1A2 487 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 SLC25A48Q6ZT89 311 aaKnown RBP9.79□□□□□ -0.84
UPF3A-210ENST00000493727 NRARPQ7Z6K4 114 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 LDLRAD3Q86YD5 345 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 C8orf31Q8N9H6 132 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 ZNF439Q8NDP4 499 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 OR13C8Q8NGS7 320 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 CT45A3Q8NHU0 189 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 ZFAND1Q8TCF1 268 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 MARCH1Q8TCQ1 289 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 TNFRSF14Q92956 283 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 ABHD14BQ96IU4 210 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 CLUHP3Q96NS8 147 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 IFI27L2Q9H2X8 130 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 TNFRSF19Q9NS68 423 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 C1RLQ9NZP8 487 aa9.79□□□□□ -0.84
UPF3A-210ENST00000493727 PIPOXQ9P0Z9 390 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms