RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 C22orf39Q6P5X5 142 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 OR51T1Q8NGJ9 327 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 OR2T6Q8NHC8 308 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 MED12Q93074 2177 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 RCHY1Q96PM5 261 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 SPIN2AQ99865 258 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 SPIN2BQ9BPZ2 258 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 PIMREGQ9BSJ6 248 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 NDFIP1Q9BT67 221 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 B9D1Q9UPM9 204 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 ASCC3Q8N3C0 2202 aaKnown RBP5.86□□□□□ -1.47
VPS13B-205ENST00000493587 MED12LQ86YW9 2145 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 CENPVL1A0A0U1RR11 272 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 A0A1B0GWA3 101 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 TMEM202A6NGA9 273 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 GPR75O95800 540 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 SRFP11831 508 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 CPMP14384 443 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 NPPBP16860 134 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 F2RP25116 425 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 SSTR5P35346 364 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 ETDBQ3ZM63 59 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 GLIPR1L1Q6UWM5 242 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 ZNF547Q8IVP9 402 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 OR5D13Q8NGL4 314 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 FGF21Q9NSA1 209 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 NECAP2Q9NVZ3 263 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 PLAGL1Q9UM63 463 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 EMC9Q9Y3B6 208 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 LOC107986453A0A1B0GWG9 222 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 TMEM250H0YL14 139 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 CMPK1P30085 196 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 TCTAP57738 103 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 RPS15AP62244 130 aaKnown RBP5.86□□□□□ -1.47
VPS13B-205ENST00000493587 TMEM97Q5BJF2 176 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 LY6G5CQ5SRR4 150 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 SLC22A24Q8N4F4 322 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 OR10D3Q8NH80 312 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 SPSB4Q96A44 273 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 OR8B2Q96RD0 313 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 TAAR6Q96RI8 345 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 NAA60Q9H7X0 242 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 SLC17A4Q9Y2C5 497 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 ZNF257Q9Y2Q1 563 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 WNT6Q9Y6F9 365 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 NDUFS4O43181 175 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 FSTP19883 344 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 BLVRBP30043 206 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-205ENST00000493587 RPS4XP62701 263 aaKnown RBP5.85□□□□□ -1.47
VPS13B-205ENST00000493587 SEC11AP67812 179 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 UNC119Q13432 240 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 DMRTC1Q5HYR2 192 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 MRPL54Q6P161 138 aaKnown RBP5.85□□□□□ -1.47
VPS13B-205ENST00000493587 KCNG3Q8TAE7 436 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 SSC4DQ8WTU2 575 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 SLC35A4Q96G79 324 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 JMJD8Q96S16 334 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 AMELYQ99218 206 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 C1QTNF4Q9BXJ3 329 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 C11orf94C9JXX5 98 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 NKX2-8O15522 239 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 LAMTOR5O43504 91 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 LATO43561 262 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 VDAC1P21796 283 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 TCL1AP56279 114 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 YPEL3P61236 119 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-205ENST00000493587 Q0VG73 95 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 FAM166AQ6J272 317 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 UFSP1Q6NVU6 142 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 OOSP2Q86WS3 158 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 GATAD1Q8WUU5 269 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 NEU4Q8WWR8 484 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-205ENST00000493587 OR5P3Q8WZ94 311 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 SCAMP4Q969E2 229 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 PIGTQ969N2 578 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 DAZAP1Q96EP5 407 aaKnown RBP5.85□□□□□ -1.47
VPS13B-205ENST00000493587 COX14Q96I36 57 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 CITED2Q99967 270 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-205ENST00000493587 AGMATQ9BSE5 352 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 TMEM191AQ9H0A3 160 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 TAC3Q9UHF0 121 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 ZNF391Q9UJN7 358 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 ERG28Q9UKR5 140 aa5.85□□□□□ -1.47
VPS13B-205ENST00000493587 TRAV1-1A0A0B4J248 108 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 WIPF3A6NGB9 483 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 CRYM-AS1A6NIL9 109 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 RAD51DO75771 328 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 NDUFB4O95168 129 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 VENTXO95231 258 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 ABHD16AO95870 558 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 TGFAP01135 160 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 LINC00869P0C866 280 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 SPINT3P49223 89 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 KIR3DS1Q14943 382 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 C1orf140Q5VVS0 124 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 LIAT1Q6ZQX7 453 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 OR1F12Q8NHA8 337 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 PLPPR1Q8TBJ4 325 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 ZNF721Q8TF20 911 aa5.84□□□□□ -1.47
VPS13B-205ENST00000493587 TECRQ9NZ01 308 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms