RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 TMEM147Q9BVK8 224 aa3□□□□□ -1.93
PTCD3-214ENST00000483925 RNASE7Q9H1E1 156 aaKnown RBP3□□□□□ -1.93
PTCD3-214ENST00000483925 SH3BGRL3Q9H299 93 aa3□□□□□ -1.93
PTCD3-214ENST00000483925 PARVBQ9HBI1 364 aa3□□□□□ -1.93
PTCD3-214ENST00000483925 GPR84Q9NQS5 396 aa3□□□□□ -1.93
PTCD3-214ENST00000483925 UQCC1Q9NVA1 299 aa3□□□□□ -1.93
PTCD3-214ENST00000483925 GINS2Q9Y248 185 aa3□□□□□ -1.93
PTCD3-214ENST00000483925 COL5A2P05997 1499 aaPredicted RBP3□□□□□ -1.93
PTCD3-214ENST00000483925 CPDO75976 1380 aa3□□□□□ -1.93
PTCD3-214ENST00000483925 DHX57Q6P158 1386 aaKnown RBP3□□□□□ -1.93
PTCD3-214ENST00000483925 TRBV6-6A0A0A6YYG2 114 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 IGHV3-43A0A0B4J1X8 118 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 TRAPPC13A5PLN9 417 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 IZUMO1RA6ND01 250 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 OR5H14A6NHG9 310 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 PIRO00625 290 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 ZNF207O43670 478 aaKnown RBP2.99□□□□□ -1.93
PTCD3-214ENST00000483925 GPR75O95800 540 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 GYPCP04921 128 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 CD7P09564 240 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 SPI1P17947 270 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 ATP6V0CP27449 155 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 ERP29P30040 261 aaKnown RBP2.99□□□□□ -1.93
PTCD3-214ENST00000483925 PHBP35232 272 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 RPS10P46783 165 aaKnown RBP2.99□□□□□ -1.93
PTCD3-214ENST00000483925 KCNJ8Q15842 424 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 RNF212Q495C1 297 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 KLHL12Q53G59 568 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 IBA57Q5T440 356 aaKnown RBP2.99□□□□□ -1.93
PTCD3-214ENST00000483925 C9orf64Q5T6V5 341 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 WDR86Q86TI4 376 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 KRTAP7-1Q8IUC3 87 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 OR13D1Q8NGV5 346 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 ITLN2Q8WWU7 325 aaPredicted RBP2.99□□□□□ -1.93
PTCD3-214ENST00000483925 BORCS5Q969J3 196 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 GNPNAT1Q96EK6 184 aaPredicted RBP2.99□□□□□ -1.93
PTCD3-214ENST00000483925 PYURFQ96I23 114 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 TBX5Q99593 518 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 NDFIP1Q9BT67 221 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 SHANK2-AS3Q9BTD1 123 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 PBDC1Q9BVG4 233 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 CXorf21Q9HAI6 301 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 TAAR3PQ9P1P4 343 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 SS18L2Q9UHA2 77 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 RWDD2AQ9UIY3 292 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 PRNDQ9UKY0 176 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 ERGIC3Q9Y282 383 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 RFNGQ9Y644 331 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 PTPRTO14522 1441 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 PEG3Q9GZU2 1588 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 TONSLQ96HA7 1378 aa2.99□□□□□ -1.93
PTCD3-214ENST00000483925 HCFC1P51610 2035 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 AHDC1Q5TGY3 1603 aaPredicted RBP2.98□□□□□ -1.93
PTCD3-214ENST00000483925 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 IGKV3D-20A0A0C4DH25 116 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 MAP1LC3B2A6NCE7 125 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 LEUTXA8MZ59 168 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.98□□□□□ -1.93
PTCD3-214ENST00000483925 AIPO00170 330 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 ORC5O43913 435 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 C1QBP02746 253 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 C8GP07360 202 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 GTF2A1P52655 376 aaPredicted RBP2.98□□□□□ -1.93
PTCD3-214ENST00000483925 RWDD2BP57060 319 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 TNFAIP6P98066 277 aaPredicted RBP2.98□□□□□ -1.93
PTCD3-214ENST00000483925 GRK1Q15835 563 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 C12orf74Q32Q52 190 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 TMEM78Q5T7P6 136 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 GLT8D1Q68CQ7 371 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 DCUN1D2Q6PH85 259 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 TOMM20LQ6UXN7 152 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 AMN1Q8IY45 258 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 C1orf174Q8IYL3 243 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 UMODL1-AS1Q8N2C9 162 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 SLC22A24Q8N4F4 322 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 OR4A5Q8NH83 315 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 CIRBP-AS1Q8TBR5 109 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 MAL2Q969L2 176 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 C12orf43Q96C57 262 aaKnown RBP2.98□□□□□ -1.93
PTCD3-214ENST00000483925 ZNF799Q96GE5 643 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 MAP1LC3BQ9GZQ8 125 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 CCDC90BQ9GZT6 254 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 FAM107BQ9H098 131 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 ZNF331Q9NQX6 463 aaPredicted RBP2.98□□□□□ -1.93
PTCD3-214ENST00000483925 ACER3Q9NUN7 267 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 SSR3Q9UNL2 185 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 COQ4Q9Y3A0 265 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 MRPS16Q9Y3D3 137 aaKnown RBP2.98□□□□□ -1.93
PTCD3-214ENST00000483925 TMEM56-RWDD3S4R434 201 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 THSD7AQ9UPZ6 1657 aa2.98□□□□□ -1.93
PTCD3-214ENST00000483925 hCG_1818297A0A087WSY0 165 aa2.97□□□□□ -1.93
PTCD3-214ENST00000483925 IGHV3-21A0A0B4J1V1 117 aa2.97□□□□□ -1.93
PTCD3-214ENST00000483925 PRORSD1PA6NEY8 169 aa2.97□□□□□ -1.93
PTCD3-214ENST00000483925 A8MT66 165 aa2.97□□□□□ -1.93
PTCD3-214ENST00000483925 H7C1C5 153 aa2.97□□□□□ -1.93
PTCD3-214ENST00000483925 MFSD11O43934 449 aa2.97□□□□□ -1.93
PTCD3-214ENST00000483925 NDUFC2O95298 119 aa2.97□□□□□ -1.93
PTCD3-214ENST00000483925 PDYNP01213 254 aa2.97□□□□□ -1.93
PTCD3-214ENST00000483925 RBP1P09455 135 aa2.97□□□□□ -1.93
PTCD3-214ENST00000483925 OR5AC1P0C628 307 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms