RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ARPC5O15511 151 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 B4GALT5O43286 388 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 FGF16O43320 207 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 EEF1E1O43324 174 aaKnown RBP2.79□□□□□ -1.96
BRCA1-212ENST00000473961 ENTPD6O75354 484 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 RPP14O95059 124 aaKnown RBP2.79□□□□□ -1.96
BRCA1-212ENST00000473961 UBL3O95164 117 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 VAMP5O95183 116 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 WISP3O95389 354 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-212ENST00000473961 RAB36O95755 333 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 ZNF682O95780 498 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 SOD1P00441 154 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 P01737 135 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 GUSBP08236 651 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 OR5AL1P0C617 328 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 ZNF688P0C7X2 276 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 RD3LP0DJH9 198 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 CD79AP11912 226 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 CCL2P13500 99 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 ZNF25P17030 456 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-212ENST00000473961 IGFBP3P17936 291 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-212ENST00000473961 PRPS1L1P21108 318 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 MPIP34949 423 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 APLNRP35414 380 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 SRP9P49458 86 aaKnown RBP2.79□□□□□ -1.96
BRCA1-212ENST00000473961 RAB8AP61006 207 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 LSM6P62312 80 aaKnown RBP2.79□□□□□ -1.96
BRCA1-212ENST00000473961 RPL23P62829 140 aaKnown RBP2.79□□□□□ -1.96
BRCA1-212ENST00000473961 CACNG7P62955 275 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 MRPS10P82664 201 aaKnown RBP2.79□□□□□ -1.96
BRCA1-212ENST00000473961 CDK5Q00535 292 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 SKP2Q13309 424 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 OR2F1Q13607 317 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 ZNF345Q14585 488 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 PAFAH1B3Q15102 231 aaKnown RBP2.79□□□□□ -1.96
BRCA1-212ENST00000473961 RSU1Q15404 277 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 DEFB116Q30KQ4 102 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 C18orf21Q32NC0 220 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-212ENST00000473961 NDUFAF6Q330K2 333 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 C9orf64Q5T6V5 341 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 NCBP2-AS2Q69YL0 99 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 HBMQ6B0K9 141 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 LPCAT3Q6P1A2 487 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 MED27Q6P2C8 311 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 SSX6Q7RTT6 188 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 SMIM15Q7Z3B0 74 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 DCXRQ7Z4W1 244 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 MDP1Q86V88 176 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 STK40Q8N2I9 435 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 KCNRGQ8N5I3 272 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 ZNF433Q8N7K0 673 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-212ENST00000473961 ZNF283Q8N7M2 679 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 OR10G2Q8NGC3 310 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 OR51A7Q8NH64 312 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 TERB2Q8NHR7 220 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 STAG3L4Q8TBR4 150 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 LGALS14Q8TCE9 139 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 C22orf15Q8WYQ4 148 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 SMARCD1Q96GM5 515 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 TLNRD1Q9H1K6 362 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 C1orf198Q9H425 327 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 POPDC3Q9HBV1 291 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 TREM1Q9NP99 234 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 ZNF302Q9NR11 478 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 UQCC1Q9NVA1 299 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 RBM22Q9NW64 420 aaKnown RBP eCLIP2.79□□□□□ -1.96
BRCA1-212ENST00000473961 TBX21Q9UL17 535 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 SLC7A11Q9UPY5 501 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 SLC22A14Q9Y267 594 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 SLC35A3Q9Y2D2 325 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 PRG3Q9Y2Y8 225 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-212ENST00000473961 PPIL1Q9Y3C6 166 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 DOCK1Q14185 1865 aa2.79□□□□□ -1.96
BRCA1-212ENST00000473961 PIKFYVEQ9Y2I7 2098 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 ANKRD31Q8N7Z5 1873 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 SBF2Q86WG5 1849 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 IGLV3-16A0A075B6K0 115 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 FXYD6-FXYD2A0A087WZ82 144 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 SMIM26A0A096LP01 95 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 IGHV2OR16-5A0A0B4J2B6 119 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 TMEM223A0PJW6 202 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 OR2AT4A6NND4 320 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 ZNF705GA8MUZ8 300 aaPredicted RBP2.78□□□□□ -1.96
BRCA1-212ENST00000473961 F5H5P2 479 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 RPL36A-HNRNPH2H7BZ11 118 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 BPY2O14599 106 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 TGOLN2O43493 480 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 IGF2P01344 180 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 ZNF35P13682 527 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 GPX2P18283 190 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 ADCYAP1P18509 176 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 FGF7P21781 194 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 NFYBP25208 207 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 GPR4P46093 362 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 IDH3GP51553 393 aaPredicted RBP2.78□□□□□ -1.96
BRCA1-212ENST00000473961 ZNF140P52738 457 aaPredicted RBP2.78□□□□□ -1.96
BRCA1-212ENST00000473961 FOXA1P55317 472 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 RPL31P62899 125 aaKnown RBP2.78□□□□□ -1.96
BRCA1-212ENST00000473961 FABP5Q01469 135 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 SIGLEC14Q08ET2 396 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms