RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 TRBV12-3P01733 135 aa13.1□□□□□ -0.31
HMGN1-210ENST00000464078 CRYGBP07316 175 aa13.1□□□□□ -0.31
HMGN1-210ENST00000464078 WNT4P56705 351 aa13.1□□□□□ -0.31
HMGN1-210ENST00000464078 QRFPP83859 136 aa13.1□□□□□ -0.31
HMGN1-210ENST00000464078 PJVKQ0ZLH3 352 aa13.1□□□□□ -0.31
HMGN1-210ENST00000464078 TATDN3Q17R31 274 aa13.1□□□□□ -0.31
HMGN1-210ENST00000464078 TTC23Q5W5X9 447 aa13.1□□□□□ -0.31
HMGN1-210ENST00000464078 GLT8D1Q68CQ7 371 aa13.1□□□□□ -0.31
HMGN1-210ENST00000464078 BVESQ8NE79 360 aa13.1□□□□□ -0.31
HMGN1-210ENST00000464078 SETD6Q8TBK2 473 aa13.1□□□□□ -0.31
HMGN1-210ENST00000464078 GGHQ92820 318 aa13.1□□□□□ -0.31
HMGN1-210ENST00000464078 S100A14Q9HCY8 104 aa13.1□□□□□ -0.31
HMGN1-210ENST00000464078 C12orf4Q9NQ89 552 aa13.1□□□□□ -0.31
HMGN1-210ENST00000464078 PLEKHJ1Q9NW61 149 aa13.1□□□□□ -0.31
HMGN1-210ENST00000464078 ADAM30Q9UKF2 790 aa13.1□□□□□ -0.31
HMGN1-210ENST00000464078 A0A0A6YYD4 124 aa13.09□□□□□ -0.31
HMGN1-210ENST00000464078 AIREO43918 545 aa13.09□□□□□ -0.31
HMGN1-210ENST00000464078 CD37P11049 281 aa13.09□□□□□ -0.31
HMGN1-210ENST00000464078 LGALS7P47929 136 aa13.09□□□□□ -0.31
HMGN1-210ENST00000464078 LINC00205P59089 165 aa13.09□□□□□ -0.31
HMGN1-210ENST00000464078 RPEL1Q2QD12 228 aa13.09□□□□□ -0.31
HMGN1-210ENST00000464078 LRRTM1Q86UE6 522 aa13.09□□□□□ -0.31
HMGN1-210ENST00000464078 SETD9Q8NE22 299 aa13.09□□□□□ -0.31
HMGN1-210ENST00000464078 FAM110AQ9BQ89 295 aa13.09□□□□□ -0.31
HMGN1-210ENST00000464078 PLEKHA3Q9HB20 300 aa13.09□□□□□ -0.31
HMGN1-210ENST00000464078 PEMTQ9UBM1 199 aa13.09□□□□□ -0.31
HMGN1-210ENST00000464078 AK3Q9UIJ7 227 aa13.09□□□□□ -0.31
HMGN1-210ENST00000464078 MYL12BO14950 172 aa13.08□□□□□ -0.32
HMGN1-210ENST00000464078 BPNT1O95861 308 aa13.08□□□□□ -0.32
HMGN1-210ENST00000464078 CD81P60033 236 aa13.08□□□□□ -0.32
HMGN1-210ENST00000464078 FAM89BQ8N5H3 189 aa13.08□□□□□ -0.32
HMGN1-210ENST00000464078 SNAPC3Q92966 411 aa13.08□□□□□ -0.32
HMGN1-210ENST00000464078 HDHD3Q9BSH5 251 aaPredicted RBP13.08□□□□□ -0.32
HMGN1-210ENST00000464078 LPAR5Q9H1C0 372 aa13.08□□□□□ -0.32
HMGN1-210ENST00000464078 KCNK15Q9H427 330 aa13.08□□□□□ -0.32
HMGN1-210ENST00000464078 Q9N2K0 584 aa13.08□□□□□ -0.32
HMGN1-210ENST00000464078 SLC35D1Q9NTN3 355 aa13.08□□□□□ -0.32
HMGN1-210ENST00000464078 HSF4Q9ULV5 492 aa13.08□□□□□ -0.32
HMGN1-210ENST00000464078 A0A0B4J203 849 aa13.07□□□□□ -0.32
HMGN1-210ENST00000464078 IGKV1-6A0A0C4DH72 117 aa13.07□□□□□ -0.32
HMGN1-210ENST00000464078 FOXI3A8MTJ6 420 aaPredicted RBP13.07□□□□□ -0.32
HMGN1-210ENST00000464078 M0R1X1 148 aa13.07□□□□□ -0.32
HMGN1-210ENST00000464078 RBMXL2O75526 392 aaKnown RBP13.07□□□□□ -0.32
HMGN1-210ENST00000464078 TPPPO94811 219 aa13.07□□□□□ -0.32
HMGN1-210ENST00000464078 SCTP09683 121 aa13.07□□□□□ -0.32
HMGN1-210ENST00000464078 SRMP19623 302 aa13.07□□□□□ -0.32
HMGN1-210ENST00000464078 DEFA5Q01523 94 aa13.07□□□□□ -0.32
HMGN1-210ENST00000464078 INSL4Q14641 139 aa13.07□□□□□ -0.32
HMGN1-210ENST00000464078 MS4A15Q8N5U1 240 aa13.07□□□□□ -0.32
HMGN1-210ENST00000464078 ADAD2Q8NCV1 583 aaKnown RBP13.07□□□□□ -0.32
HMGN1-210ENST00000464078 OR6M1Q8NGM8 313 aa13.07□□□□□ -0.32
HMGN1-210ENST00000464078 HARBI1Q96MB7 349 aa13.07□□□□□ -0.32
HMGN1-210ENST00000464078 NEURL2Q9BR09 285 aa13.07□□□□□ -0.32
HMGN1-210ENST00000464078 COA4Q9NYJ1 87 aa13.07□□□□□ -0.32
HMGN1-210ENST00000464078 RDH8Q9NYR8 311 aa13.07□□□□□ -0.32
HMGN1-210ENST00000464078 TAGLNQ01995 201 aaKnown RBP13.06□□□□□ -0.32
HMGN1-210ENST00000464078 ACSM3Q53FZ2 586 aa13.06□□□□□ -0.32
HMGN1-210ENST00000464078 TMEM177Q53S58 311 aa13.06□□□□□ -0.32
HMGN1-210ENST00000464078 RBM48Q5RL73 367 aaKnown RBP13.06□□□□□ -0.32
HMGN1-210ENST00000464078 RNLSQ5VYX0 342 aa13.06□□□□□ -0.32
HMGN1-210ENST00000464078 URM1Q9BTM9 101 aaKnown RBP13.06□□□□□ -0.32
HMGN1-210ENST00000464078 SLC2A8Q9NY64 477 aa13.06□□□□□ -0.32
HMGN1-210ENST00000464078 RBMY1BA6NDE4 496 aaKnown RBP13.05□□□□□ -0.32
HMGN1-210ENST00000464078 RBMY1EA6NEQ0 496 aaKnown RBP13.05□□□□□ -0.32
HMGN1-210ENST00000464078 FAM223BA6NKX1 122 aa13.05□□□□□ -0.32
HMGN1-210ENST00000464078 BMPR1BO00238 502 aa13.05□□□□□ -0.32
HMGN1-210ENST00000464078 SOCS1O15524 211 aa13.05□□□□□ -0.32
HMGN1-210ENST00000464078 RBMY1DP0C7P1 496 aaKnown RBP13.05□□□□□ -0.32
HMGN1-210ENST00000464078 SERPINB10P48595 397 aa13.05□□□□□ -0.32
HMGN1-210ENST00000464078 MRGPRG-AS1Q2M3A8 158 aa13.05□□□□□ -0.32
HMGN1-210ENST00000464078 CD300EQ496F6 205 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-210ENST00000464078 FAM223AQ8IWN6 122 aa13.05□□□□□ -0.32
HMGN1-210ENST00000464078 NANOGP1Q8N7R0 232 aa13.05□□□□□ -0.32
HMGN1-210ENST00000464078 CYGBQ8WWM9 190 aa13.05□□□□□ -0.32
HMGN1-210ENST00000464078 LINC00476Q8WZB0 136 aa13.05□□□□□ -0.32
HMGN1-210ENST00000464078 ZC4H2Q9NQZ6 224 aa13.05□□□□□ -0.32
HMGN1-210ENST00000464078 ZNF230Q9UIE0 474 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-210ENST00000464078 PSORS1C1Q9UIG5 152 aa13.05□□□□□ -0.32
HMGN1-210ENST00000464078 ZNF785A8K8V0 405 aa13.04□□□□□ -0.32
HMGN1-210ENST00000464078 OR9G9P0C7N8 305 aa13.04□□□□□ -0.32
HMGN1-210ENST00000464078 LAIR2Q6ISS4 152 aa13.04□□□□□ -0.32
HMGN1-210ENST00000464078 AHSA2Q719I0 299 aa13.04□□□□□ -0.32
HMGN1-210ENST00000464078 PLCXD1Q9NUJ7 323 aa13.04□□□□□ -0.32
HMGN1-210ENST00000464078 TRBV9A0A0B4J1U6 114 aa13.03□□□□□ -0.32
HMGN1-210ENST00000464078 TRDCB7Z8K6 153 aa13.03□□□□□ -0.32
HMGN1-210ENST00000464078 DIRAS3O95661 229 aa13.03□□□□□ -0.32
HMGN1-210ENST00000464078 CD7P09564 240 aa13.03□□□□□ -0.32
HMGN1-210ENST00000464078 RHOGP84095 191 aa13.03□□□□□ -0.32
HMGN1-210ENST00000464078 CBX3Q13185 183 aa13.03□□□□□ -0.32
HMGN1-210ENST00000464078 EXOSC2Q13868 293 aaKnown RBP13.03□□□□□ -0.32
HMGN1-210ENST00000464078 RTL8BQ17RB0 113 aa13.03□□□□□ -0.32
HMGN1-210ENST00000464078 FAM209BQ5JX69 171 aa13.03□□□□□ -0.32
HMGN1-210ENST00000464078 DEFB125Q8N687 156 aa13.03□□□□□ -0.32
HMGN1-210ENST00000464078 OR4A4PQ8NGN8 299 aa13.03□□□□□ -0.32
HMGN1-210ENST00000464078 OR2D2Q9H210 308 aa13.03□□□□□ -0.32
HMGN1-210ENST00000464078 SRD5A3Q9H8P0 318 aa13.03□□□□□ -0.32
HMGN1-210ENST00000464078 AKIP1Q9NQ31 210 aa13.03□□□□□ -0.32
HMGN1-210ENST00000464078 C8orf4Q9NR00 106 aa13.03□□□□□ -0.32
HMGN1-210ENST00000464078 FKBP14Q9NWM8 211 aa13.03□□□□□ -0.32
HMGN1-210ENST00000464078 SDHAF2Q9NX18 166 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms