RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 C1orf162Q8NEQ5 155 aaPredicted RBP13.65□□□□□ -0.22
PTPN13-204ENST00000436978 LNP1A1A4G5 178 aa13.65□□□□□ -0.22
PTPN13-204ENST00000436978 APOBEC3AP31941 199 aaPredicted RBP13.65□□□□□ -0.22
PTPN13-204ENST00000436978 C10orf128Q5T292 105 aa13.65□□□□□ -0.22
PTPN13-204ENST00000436978 LDLRAD3Q86YD5 345 aa13.65□□□□□ -0.22
PTPN13-204ENST00000436978 QTRT1Q9BXR0 403 aaKnown RBP13.65□□□□□ -0.22
PTPN13-204ENST00000436978 FOXJ2Q9P0K8 574 aa13.65□□□□□ -0.22
PTPN13-204ENST00000436978 IGLV3-19P01714 112 aa13.65□□□□□ -0.22
PTPN13-204ENST00000436978 TMEM218A2RU14 115 aa13.65□□□□□ -0.22
PTPN13-204ENST00000436978 TIMM23BQ5SRD1 257 aa13.65□□□□□ -0.22
PTPN13-204ENST00000436978 ZNF430Q9H8G1 570 aaPredicted RBP13.65□□□□□ -0.22
PTPN13-204ENST00000436978 A0A1W2PQM1 296 aa13.65□□□□□ -0.23
PTPN13-204ENST00000436978 TMEM189A5PLL7 270 aa13.65□□□□□ -0.23
PTPN13-204ENST00000436978 SULT1A2P50226 295 aa13.65□□□□□ -0.23
PTPN13-204ENST00000436978 TMEM229AB2RXF0 380 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 TCL1AP56279 114 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 RPS20P60866 119 aaKnown RBP13.64□□□□□ -0.23
PTPN13-204ENST00000436978 HIST3H3Q16695 136 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 POM121Q96HA1 1249 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 RALYQ9UKM9 306 aaKnown RBP13.64□□□□□ -0.23
PTPN13-204ENST00000436978 ZNF253O75346 499 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 PTBP3O95758 552 aaKnown RBP13.64□□□□□ -0.23
PTPN13-204ENST00000436978 FADS6Q8N9I5 356 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 CSN3P07498 182 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 RD3LP0DJH9 198 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 RFLNBQ8N5W9 214 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 COPS9Q8WXC6 57 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 EEF1AKMT3Q96AZ1 226 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 C19orf24Q9BVV8 132 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 CDC42EP3Q9UKI2 254 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 H3BQ15 152 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 CIDEAO60543 219 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 SCTP09683 121 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 DLX1P56177 255 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 BPIFA4PQ86YQ2 179 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 IL22RA2Q969J5 263 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 AUP1Q9Y679 476 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 NLRC5Q86WI3 1866 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 BCL2P10415 239 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 FAM3BP58499 235 aaPredicted RBP13.64□□□□□ -0.23
PTPN13-204ENST00000436978 RNFT1Q5M7Z0 435 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 MUC15Q8N387 334 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 OR5AU1Q8NGC0 362 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 IL36RNQ9UBH0 155 aa13.64□□□□□ -0.23
PTPN13-204ENST00000436978 IGHV3-21A0A0B4J1V1 117 aa13.63□□□□□ -0.23
PTPN13-204ENST00000436978 TRAV39A0A0B4J263 110 aa13.63□□□□□ -0.23
PTPN13-204ENST00000436978 A0A1W2PR77 199 aa13.63□□□□□ -0.23
PTPN13-204ENST00000436978 OR9G1Q8NH87 305 aa13.63□□□□□ -0.23
PTPN13-204ENST00000436978 ATG101Q9BSB4 218 aa13.63□□□□□ -0.23
PTPN13-204ENST00000436978 A8MWL6 223 aa13.63□□□□□ -0.23
PTPN13-204ENST00000436978 CRXO43186 299 aaPredicted RBP13.63□□□□□ -0.23
PTPN13-204ENST00000436978 ATP6V0CP27449 155 aa13.63□□□□□ -0.23
PTPN13-204ENST00000436978 UNQ5815/PRO19632Q6UWF5 114 aa13.63□□□□□ -0.23
PTPN13-204ENST00000436978 TMEM74BQ9NUR3 256 aa13.63□□□□□ -0.23
PTPN13-204ENST00000436978 ATP5IP56385 69 aaPredicted RBP13.63□□□□□ -0.23
PTPN13-204ENST00000436978 LSM10Q969L4 123 aaKnown RBP13.63□□□□□ -0.23
PTPN13-204ENST00000436978 KMT2EQ8IZD2 1858 aa13.63□□□□□ -0.23
PTPN13-204ENST00000436978 TSPOP30536 169 aa13.63□□□□□ -0.23
PTPN13-204ENST00000436978 NRN1LQ496H8 165 aa13.63□□□□□ -0.23
PTPN13-204ENST00000436978 C1orf100Q5SVJ3 147 aa13.63□□□□□ -0.23
PTPN13-204ENST00000436978 ZNF146Q15072 292 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 DCTN5Q9BTE1 182 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 GUCA2BQ16661 112 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 TRBV5-7A0A0A0MS05 114 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 A6NDN8 102 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 TM4SF5O14894 197 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 FOXL2P58012 376 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 CXorf66Q5JRM2 361 aaPredicted RBP13.62□□□□□ -0.23
PTPN13-204ENST00000436978 FBLIM1Q8WUP2 373 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 CHODLQ9H9P2 273 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 TMEM140Q9NV12 185 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 DLL3Q9NYJ7 618 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 LINC00869P0C866 280 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 FAM53AQ6NSI3 398 aaPredicted RBP13.62□□□□□ -0.23
PTPN13-204ENST00000436978 ABHD12Q8N2K0 398 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 NUP37Q8NFH4 326 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 RAX2Q96IS3 184 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 NPIPB6E9PJ23 425 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 FDCSPQ8NFU4 85 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 hCG_38984A0A1B0GV85 526 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 APC2O95996 2303 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 IGKV3-11P04433 115 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 MAS1LP35410 378 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 WDFY1Q8IWB7 410 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 WNT5BQ9H1J7 359 aa13.62□□□□□ -0.23
PTPN13-204ENST00000436978 ZNF703Q9H7S9 590 aaPredicted RBP13.62□□□□□ -0.23
PTPN13-204ENST00000436978 SNRPEP62304 92 aaKnown RBP13.61□□□□□ -0.23
PTPN13-204ENST00000436978 ZNF79Q15937 498 aa13.61□□□□□ -0.23
PTPN13-204ENST00000436978 SLC25A53Q5H9E4 307 aa13.61□□□□□ -0.23
PTPN13-204ENST00000436978 SPSB2Q99619 263 aa13.61□□□□□ -0.23
PTPN13-204ENST00000436978 MRPS18CQ9Y3D5 142 aaKnown RBP13.61□□□□□ -0.23
PTPN13-204ENST00000436978 LBHQ53QV2 105 aaPredicted RBP13.61□□□□□ -0.23
PTPN13-204ENST00000436978 DNM1P46Q6ZS02 220 aa13.61□□□□□ -0.23
PTPN13-204ENST00000436978 PPP1R32Q7Z5V6 425 aa13.61□□□□□ -0.23
PTPN13-204ENST00000436978 NEU4Q8WWR8 484 aaPredicted RBP13.61□□□□□ -0.23
PTPN13-204ENST00000436978 OR5P3Q8WZ94 311 aa13.61□□□□□ -0.23
PTPN13-204ENST00000436978 TCF20Q9UGU0 1960 aaKnown RBP13.61□□□□□ -0.23
PTPN13-204ENST00000436978 SNURFLB1AK76 121 aa13.61□□□□□ -0.23
PTPN13-204ENST00000436978 SNRPD3P62318 126 aaKnown RBP13.61□□□□□ -0.23
PTPN13-204ENST00000436978 MRPL54Q6P161 138 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms