RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 AMBPP02760 352 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 SRD5A2P31213 254 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 ASPHD1Q5U4P2 390 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 CMTM2Q8TAZ6 248 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 DERL1Q9BUN8 251 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 RNF24Q9Y225 148 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 C17orf112F2Z3M2 114 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 ATP5G3P48201 142 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 ZNF506Q5JVG8 444 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 C10orf91Q5T1B1 145 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 C20orf204Q6ZNR8 217 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 TMEM256Q8N2U0 113 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 NABP1Q96AH0 204 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 CRIM1Q9NZV1 1036 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 SPG11Q96JI7 2443 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 PCNX2A6NKB5 2137 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 C1QTNF9P0C862 333 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 GPR12P47775 334 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 GNG10P50151 68 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 RNF122Q9H9V4 155 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 DLL3Q9NYJ7 618 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 PPIAL4AQ9Y536 164 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 IGLV3-32A0A0A0MS00 114 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 RAMP3O60896 148 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 NAPSAO96009 420 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 OR10J4P0C629 311 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 FOLR2P14207 255 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 CRISP2P16562 243 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 CNN1P51911 297 aaKnown RBP11.23□□□□□ -0.61
NFKB1-202ENST00000394820 PNRC1Q12796 327 aaPredicted RBP11.23□□□□□ -0.61
NFKB1-202ENST00000394820 ZNF664Q8N3J9 261 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 OR4D5Q8NGN0 318 aa11.23□□□□□ -0.61
NFKB1-202ENST00000394820 EREGO14944 169 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 MPZP25189 248 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 OTX1P32242 354 aaPredicted RBP11.22□□□□□ -0.61
NFKB1-202ENST00000394820 ZNF124Q15973 351 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 MIC13Q5XKP0 118 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 ATP23Q9Y6H3 246 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 LOC102723996A0A087X1L8 192 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 SYNGR3O43761 229 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 S1PR2O95136 353 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 GCH1P30793 250 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 ZFP36L1Q07352 338 aaKnown RBP11.22□□□□□ -0.61
NFKB1-202ENST00000394820 OR1C1Q15619 314 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 ACOT6Q3I5F7 207 aaPredicted RBP11.22□□□□□ -0.61
NFKB1-202ENST00000394820 ABHD12Q8N2K0 398 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 HIPK2Q9H2X6 1198 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 TAAR3PQ9P1P4 343 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 COL4A2P08572 1712 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 CEACAM1P13688 526 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 FKBP2P26885 142 aaKnown RBP11.22□□□□□ -0.61
NFKB1-202ENST00000394820 ACY3Q96HD9 319 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 CTDSP1Q9GZU7 261 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 SDF2L1Q9HCN8 221 aa11.22□□□□□ -0.61
NFKB1-202ENST00000394820 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.22□□□□□ -0.61
NFKB1-202ENST00000394820 SNURFLB1AK76 121 aa11.21□□□□□ -0.61
NFKB1-202ENST00000394820 TNFSF15O95150 251 aa11.21□□□□□ -0.61
NFKB1-202ENST00000394820 HOXB1P14653 301 aaPredicted RBP11.21□□□□□ -0.61
NFKB1-202ENST00000394820 OR4P4Q8NGL7 312 aa11.21□□□□□ -0.61
NFKB1-202ENST00000394820 TMEM54Q969K7 222 aa11.21□□□□□ -0.61
NFKB1-202ENST00000394820 RTL8AQ9BWD3 113 aa11.21□□□□□ -0.61
NFKB1-202ENST00000394820 TECRQ9NZ01 308 aaKnown RBP11.21□□□□□ -0.61
NFKB1-202ENST00000394820 IGHV3OR15-7A0A075B7D8 119 aa11.21□□□□□ -0.61
NFKB1-202ENST00000394820 NTN3O00634 580 aaPredicted RBP11.21□□□□□ -0.61
NFKB1-202ENST00000394820 SPINT2O43291 252 aa11.21□□□□□ -0.61
NFKB1-202ENST00000394820 IL15RAQ13261 267 aa11.21□□□□□ -0.61
NFKB1-202ENST00000394820 SSX7Q7RTT5 188 aa11.21□□□□□ -0.61
NFKB1-202ENST00000394820 LYPD6Q86Y78 171 aa11.21□□□□□ -0.61
NFKB1-202ENST00000394820 C1QL4Q86Z23 238 aa11.21□□□□□ -0.61
NFKB1-202ENST00000394820 hCG_38984A0A1B0GV85 526 aa11.21□□□□□ -0.62
NFKB1-202ENST00000394820 DUXBA0A1W2PPF3 345 aa11.21□□□□□ -0.62
NFKB1-202ENST00000394820 LNP1A1A4G5 178 aa11.21□□□□□ -0.62
NFKB1-202ENST00000394820 SSTR5P35346 364 aa11.21□□□□□ -0.62
NFKB1-202ENST00000394820 UCP3P55916 312 aa11.21□□□□□ -0.62
NFKB1-202ENST00000394820 FGF12P61328 243 aa11.21□□□□□ -0.62
NFKB1-202ENST00000394820 GNB2P62879 340 aa11.21□□□□□ -0.62
NFKB1-202ENST00000394820 TRA2AQ13595 282 aaKnown RBP eCLIP11.21□□□□□ -0.62
NFKB1-202ENST00000394820 RPP25LQ8N5L8 163 aaKnown RBP11.21□□□□□ -0.62
NFKB1-202ENST00000394820 SEBOXQ9HB31 216 aaPredicted RBP11.21□□□□□ -0.62
NFKB1-202ENST00000394820 FBLN5Q9UBX5 448 aa11.21□□□□□ -0.62
NFKB1-202ENST00000394820 PLXNB1O43157 2135 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 IFITM10A6NMD0 228 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 OR2H2O95918 312 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 RPL23P62829 140 aaKnown RBP11.2□□□□□ -0.62
NFKB1-202ENST00000394820 RAB31Q13636 194 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 DRAM1Q8N682 238 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 WNT10AQ9GZT5 417 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.2□□□□□ -0.621e-6■■■■■ 26.9
NFKB1-202ENST00000394820 A0A1B0GU03 582 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 RNF212BA8MTL3 300 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 ZNF253O75346 499 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 PLAUP00749 431 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 SSPNQ14714 243 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 HIST3H3Q16695 136 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 DMRTA1Q5VZB9 504 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 TMEM183AQ8IXX5 376 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 BORCS7Q96B45 105 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 CBY3A6NI87 242 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 RRP8O43159 456 aaKnown RBP11.2□□□□□ -0.62
NFKB1-202ENST00000394820 DKK1O94907 266 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms