RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 A0A0U1RQK1 487 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 ZNF320A2RRD8 509 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 ANKRD30BLA7E2S9 258 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 CCKARP32238 428 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 CYB561P49447 251 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 TNFRSF9Q07011 255 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 ABHD17BQ5VST6 288 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 CISD2Q8N5K1 135 aaKnown RBP9.35□□□□□ -0.91
CCDC40-203ENST00000374877 MANBALQ9NQG1 85 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 IGHV3-64DA0A0J9YX35 117 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 ZNF503-AS2A6NEH8 195 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 GGCTO75223 188 aaKnown RBP9.34□□□□□ -0.91
CCDC40-203ENST00000374877 RBMXL2O75526 392 aaKnown RBP9.34□□□□□ -0.91
CCDC40-203ENST00000374877 CRYAAP02489 173 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 TFF3Q07654 80 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 DRAM1Q8N682 238 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 ZNF709Q8N972 641 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 USF3Q68DE3 2245 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 NCKAP5O14513 1909 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 COX5AP20674 150 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 IL3RAP26951 378 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 G6PCP35575 357 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 UBE2G2P60604 165 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 ZNF816Q0VGE8 651 aaPredicted RBP9.34□□□□□ -0.91
CCDC40-203ENST00000374877 CST9LP1Q5W188 147 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 TMEM14EPQ6UXP3 125 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 CENPVQ7Z7K6 275 aaPredicted RBP9.34□□□□□ -0.91
CCDC40-203ENST00000374877 LRP11Q86VZ4 500 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 ZNF573Q86YE8 665 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 GBGT1Q8N5D6 347 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 TMEM147Q9BVK8 224 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 TIMM9Q9Y5J7 89 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 TRAPPC1Q9Y5R8 145 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 CELSR3Q9NYQ7 3312 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 TRBV6-6A0A0A6YYG2 114 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 ZNF705FA8MVS1 300 aaPredicted RBP9.34□□□□□ -0.91
CCDC40-203ENST00000374877 C11orf94C9JXX5 98 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 ZNF705DP0CH99 300 aaPredicted RBP9.34□□□□□ -0.91
CCDC40-203ENST00000374877 ZNF705BP0CI00 300 aaPredicted RBP9.34□□□□□ -0.91
CCDC40-203ENST00000374877 SRP14P37108 136 aaKnown RBP9.34□□□□□ -0.91
CCDC40-203ENST00000374877 GNG3P63215 75 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 SPINK9Q5DT21 86 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 OR5P3Q8WZ94 311 aa9.34□□□□□ -0.91
CCDC40-203ENST00000374877 PARD6GQ9BYG4 376 aaPredicted RBP9.34□□□□□ -0.91
CCDC40-203ENST00000374877 ZNF891A8MT65 544 aaPredicted RBP9.33□□□□□ -0.92
CCDC40-203ENST00000374877 CA6P23280 308 aa9.33□□□□□ -0.92
CCDC40-203ENST00000374877 LINC00596Q86U02 117 aa9.33□□□□□ -0.92
CCDC40-203ENST00000374877 TMEM256Q8N2U0 113 aa9.33□□□□□ -0.92
CCDC40-203ENST00000374877 ZNF808Q8N4W9 903 aaPredicted RBP9.33□□□□□ -0.92
CCDC40-203ENST00000374877 OR10P1Q8NGE3 313 aa9.33□□□□□ -0.92
CCDC40-203ENST00000374877 M0R143 59 aa9.33□□□□□ -0.92
CCDC40-203ENST00000374877 RAMP3O60896 148 aa9.33□□□□□ -0.92
CCDC40-203ENST00000374877 MBP02144 154 aa9.33□□□□□ -0.92
CCDC40-203ENST00000374877 RPL29P47914 159 aaKnown RBP9.33□□□□□ -0.92
CCDC40-203ENST00000374877 PPP1CBP62140 327 aa9.33□□□□□ -0.92
CCDC40-203ENST00000374877 SPATA46Q5T0L3 261 aa9.33□□□□□ -0.92
CCDC40-203ENST00000374877 VASH2Q86V25 355 aa9.33□□□□□ -0.92
CCDC40-203ENST00000374877 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.32□□□□□ -0.92
CCDC40-203ENST00000374877 WNT5AP41221 380 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 ERVFC1-1P60608 527 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 TUSC5Q8IXB3 177 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 MS4A10Q96PG2 267 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 DEPPQ9NTK1 212 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 MRPS18CQ9Y3D5 142 aaKnown RBP9.32□□□□□ -0.92
CCDC40-203ENST00000374877 MED12LQ86YW9 2145 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 PGPEP1LA6NFU8 196 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 ZG16O60844 167 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 NPPCP23582 126 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 ZDHHC16Q969W1 377 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 NPCDR1Q9BY65 106 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 NAGKQ9UJ70 344 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 POLR3KQ9Y2Y1 108 aaPredicted RBP9.32□□□□□ -0.92
CCDC40-203ENST00000374877 PINLYPA6NC86 204 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 FAM90A26D6RGX4 464 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 SYNGR4O95473 234 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 TYMSP04818 313 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 ZNF25P17030 456 aaPredicted RBP9.32□□□□□ -0.92
CCDC40-203ENST00000374877 PLP2Q04941 152 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 MSMO1Q15800 293 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 ZNF705AQ6ZN79 300 aaPredicted RBP9.32□□□□□ -0.92
CCDC40-203ENST00000374877 ZNF292O60281 2723 aa9.32□□□□□ -0.92
CCDC40-203ENST00000374877 DNAJC13O75165 2243 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 VENTXO95231 258 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 OR2H2O95918 312 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 CD33P20138 364 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 CDC34P49427 236 aaPredicted RBP9.31□□□□□ -0.92
CCDC40-203ENST00000374877 OR1L1Q8NH94 360 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 DERL1Q9BUN8 251 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 ODAMA1E959 279 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 OR5B21A6NL26 309 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 RNF212BA8MTL3 300 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 NPIPB11E5RHQ5 1161 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 NKX2-8O15522 239 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 NUPR1O60356 82 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 NDUFB4O95168 129 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 C1QTNF9P0C862 333 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 GCH1P30793 250 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 ATP5G3P48201 142 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 ATP6V1FQ16864 119 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 TCF23Q7RTU1 214 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms