RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 ZCCHC14Q8WYQ9 949 aaKnown RBP9.93□□□□□ -0.82
VCL-202ENST00000372755 GPR146Q96CH1 333 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 QTRT1Q9BXR0 403 aaKnown RBP9.93□□□□□ -0.82
VCL-202ENST00000372755 CHODLQ9H9P2 273 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 CENPVL1A0A0U1RR11 272 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 SLC25A17O43808 307 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 COX5BP10606 129 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 DNM1P46Q6ZS02 220 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 OR10S1Q8NGN2 331 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 MRPL32Q9BYC8 188 aaKnown RBP9.93□□□□□ -0.82
VCL-202ENST00000372755 ADAMTSL3P82987 1691 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 NHSQ6T4R5 1651 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 SNRPCP09234 159 aaKnown RBP9.93□□□□□ -0.82
VCL-202ENST00000372755 OR1P1Q8NH06 330 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 LHFPL5Q8TAF8 219 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 RTN4RQ9BZR6 473 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 ZNF729A6NN14 1252 aaPredicted RBP9.92□□□□□ -0.82
VCL-202ENST00000372755 UQCR10Q9UDW1 63 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 SIRT4Q9Y6E7 314 aaPredicted RBP9.92□□□□□ -0.82
VCL-202ENST00000372755 GDF9O60383 454 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 IFI6P09912 130 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 HKR1P10072 659 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 CXCL2P19875 107 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 LIMS1P48059 325 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 PDLIM4P50479 330 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 SNRPD3P62318 126 aaKnown RBP9.92□□□□□ -0.82
VCL-202ENST00000372755 C1orf100Q5SVJ3 147 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 ABHD12Q8N2K0 398 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 DLL3Q9NYJ7 618 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 LOC105371242A0A075B767 164 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 PRSS2P07478 247 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 FOLR2P14207 255 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 FCARP24071 287 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 DCAF12L2Q5VW00 463 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 ZNF826PQ6ZT77 177 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 OR51G1Q8NGK1 321 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 SP7Q8TDD2 431 aaPredicted RBP9.92□□□□□ -0.82
VCL-202ENST00000372755 SPSB4Q96A44 273 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 HINT1P49773 126 aaPredicted RBP9.92□□□□□ -0.82
VCL-202ENST00000372755 UNC119Q13432 240 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 OR10AG1Q8NH19 301 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 KIR2DL4Q99706 377 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 GEMIN7Q9H840 131 aaKnown RBP9.92□□□□□ -0.82
VCL-202ENST00000372755 SHROOM3Q8TF72 1996 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 PAPPAQ13219 1627 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 NPPCP23582 126 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 SLC25A34Q6PIV7 304 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 ARL6IP6Q8N6S5 226 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 SRSF12Q8WXF0 261 aaKnown RBP9.92□□□□□ -0.82
VCL-202ENST00000372755 AQP3Q92482 292 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 PMCHL2Q9BQD1 86 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 MRPL13Q9BYD1 178 aaKnown RBP9.92□□□□□ -0.82
VCL-202ENST00000372755 PPP1R3EQ9H7J1 279 aa9.92□□□□□ -0.82
VCL-202ENST00000372755 IGKV3D-11A0A0A0MRZ8 115 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 IGKV3-11P04433 115 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 MDKP21741 143 aaPredicted RBP9.91□□□□□ -0.82
VCL-202ENST00000372755 C10orf111Q8N326 155 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 CLEC7AQ9BXN2 247 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 PILRAQ9UKJ1 303 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 TRBV9A0A0B4J1U6 114 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 NPIPB11E5RHQ5 1161 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 THY1P04216 161 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 CELA2AP08217 269 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 ATP5IP56385 69 aaPredicted RBP9.91□□□□□ -0.82
VCL-202ENST00000372755 ZNF56Q15929 161 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 RFLNBQ8N5W9 214 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 OR4C13Q8NGP0 309 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 NPFFO15130 113 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 NKX2-8O15522 239 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 HLA-DRB1P01911 266 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 TRGC2P03986 189 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 P2RY4P51582 365 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 TNFRSF9Q07011 255 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 DCTN5Q9BTE1 182 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 TLNRD1Q9H1K6 362 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 USP54Q70EL1 1684 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 RPS11P62280 158 aaKnown RBP eCLIP9.91□□□□□ -0.82
VCL-202ENST00000372755 DOCK1Q14185 1865 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 MS4A3Q96HJ5 214 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 TRPM3Q9HCF6 1732 aaPredicted RBP9.91□□□□□ -0.82
VCL-202ENST00000372755 IGLV1-36A0A0B4J1U3 117 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 HLA-DQB1P01920 261 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 PTGDSP41222 190 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 ZNF146Q15072 292 aa9.91□□□□□ -0.82
VCL-202ENST00000372755 CXorf66Q5JRM2 361 aaPredicted RBP9.9□□□□□ -0.82
VCL-202ENST00000372755 MARCH11A6NNE9 402 aa9.9□□□□□ -0.82
VCL-202ENST00000372755 ATXN7O15265 892 aaPredicted RBP9.9□□□□□ -0.82
VCL-202ENST00000372755 F12P00748 615 aaPredicted RBP9.9□□□□□ -0.82
VCL-202ENST00000372755 LIPFP07098 398 aa9.9□□□□□ -0.82
VCL-202ENST00000372755 TMEM136Q6ZRR5 245 aa9.9□□□□□ -0.82
VCL-202ENST00000372755 AQP10Q96PS8 301 aa9.9□□□□□ -0.82
VCL-202ENST00000372755 CXorf65A6NEN9 183 aa9.9□□□□□ -0.82
VCL-202ENST00000372755 ARL14EPLP0DKL9 152 aa9.9□□□□□ -0.82
VCL-202ENST00000372755 RIPPLY2Q5TAB7 128 aa9.9□□□□□ -0.82
VCL-202ENST00000372755 REC114Q7Z4M0 266 aa9.9□□□□□ -0.82
VCL-202ENST00000372755 KCNE5Q9UJ90 142 aa9.9□□□□□ -0.82
VCL-202ENST00000372755 MOSPD3O75425 235 aa9.9□□□□□ -0.82
VCL-202ENST00000372755 ALKBH7Q9BT30 221 aaPredicted RBP9.9□□□□□ -0.82
VCL-202ENST00000372755 ATP5J2P56134 94 aa9.9□□□□□ -0.83
VCL-202ENST00000372755 SMIM8Q96KF7 97 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms