RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 DENRO43583 198 aaKnown RBP6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 CIB2O75838 187 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 RAP2AP10114 183 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 CD40LGP29965 261 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 HSPA13P48723 471 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 FAM98BQ52LJ0 330 aaKnown RBP6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 DMKNQ6E0U4 476 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 SLC16A13Q7RTY0 426 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 PARP16Q8N5Y8 322 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 OR5AN1Q8NGI8 311 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 OR52B4Q8NGK2 314 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 NEK7Q8TDX7 302 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 C2CD4CQ8TF44 421 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 SNAPC3Q92966 411 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 MRPS24Q96EL2 167 aaKnown RBP6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 PELI1Q96FA3 418 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 ZNF556Q9HAH1 456 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 AKIP1Q9NQ31 210 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 hCG_2014768A0A024R1R8 64 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 TMEM213A2RRL7 107 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 ZAR1LA6NP61 321 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 E9PI62 339 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 J3QRE1 110 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 SHOXO15266 292 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 CDK2AP2O75956 126 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 OR2C1O95371 312 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 TNFAIP8O95379 198 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 IGLV2-23P01705 113 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 CRYGBP07316 175 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 SERPINA2P20848 420 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 AADACP22760 399 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 CBLN1P23435 193 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 EIF2B2P49770 351 aaKnown RBP6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 CCR9P51686 369 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 B2MP61769 119 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 EXOSC2Q13868 293 aaKnown RBP6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 RBMS2Q15434 407 aaKnown RBP6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 TMEM30BQ3MIR4 351 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 FAM122CQ6P4D5 195 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 Q8N1X5 172 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 ADAD2Q8NCV1 583 aaKnown RBP6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 C11orf45Q8TAV5 145 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 MRPL30Q8TCC3 161 aaKnown RBP6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 GHSRQ92847 366 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 TAS2R4Q9NYW5 299 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 TECRQ9NZ01 308 aaKnown RBP6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 IL36GQ9NZH8 169 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 H2AFY2Q9P0M6 372 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 WARS2Q9UGM6 360 aaKnown RBP6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 UBQLN2Q9UHD9 624 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 ING4Q9UNL4 249 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 POMPQ9Y244 141 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 DNAH5Q8TE73 4624 aa6.22□□□□□ -1.41
HMGB1P39-201ENST00000366304 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 OR5H14A6NHG9 310 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 AQP12BA6NM10 295 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 H7C2Y5 167 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 YPEL1O60688 119 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 MAS1P04201 325 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 ANXA8P13928 327 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 RPL35AP18077 110 aaKnown RBP6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 RHOGP84095 191 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 FLOT2Q14254 428 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 C6orf183Q5T699 404 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 ZNF57Q68EA5 555 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 IDO2Q6ZQW0 420 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 C19orf35Q6ZS72 473 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 FAM220AQ7Z4H9 259 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 GID4Q8IVV7 300 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 SERPINA12Q8IW75 414 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 AQP12AQ8IXF9 295 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 TMEM217Q8N7C4 229 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 ZNF383Q8NA42 475 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 OR5D14Q8NGL3 314 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 CANT1Q8WVQ1 401 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 FAM46BQ96A09 425 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 ORAI1Q96D31 301 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 ABHD14BQ96IU4 210 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 USMG5Q96IX5 58 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 YPEL2Q96QA6 119 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 GPER1Q99527 375 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 TEX12Q9BXU0 123 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 COA4Q9NYJ1 87 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 FBXL7Q9UJT9 491 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 JPT1Q9UK76 154 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 RAB26Q9ULW5 256 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 WASHC3Q9Y3C0 194 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 MYCBP2O75592 4640 aa6.21□□□□□ -1.42
HMGB1P39-201ENST00000366304 SRRM2Q9UQ35 2752 aaKnown RBP6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 TRBV9A0A0B4J1U6 114 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 A0A0B4J203 849 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 UBE2QL1A1L167 161 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 SNTNA6NMZ2 147 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 NPIPB6E9PJ23 425 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 BOLA2-SMG1P6H3BVE0 249 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 LGALS9O00182 355 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 UBE2CO00762 179 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 BET1O15155 118 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 SLC16A6O15403 523 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 SC5DO75845 299 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms