RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 PHYHIPLQ96FC7 376 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 AIFM2Q9BRQ8 373 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 ABHD14AQ9BUJ0 271 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 ARL6Q9H0F7 186 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 PRELID3BQ9Y3B1 194 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 U3KQ87 197 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 ATRQ13535 2644 aa10.87□□□□□ -0.67
SLIRP-201ENST00000238688 A0A087X0M5 115 aa10.86□□□□□ -0.67
SLIRP-201ENST00000238688 A0A1B0GX30 115 aa10.86□□□□□ -0.67
SLIRP-201ENST00000238688 KIAA1324LA8MWY0 1029 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-201ENST00000238688 CXCL2P19875 107 aa10.86□□□□□ -0.67
SLIRP-201ENST00000238688 UBA52P62987 128 aaKnown RBP10.86□□□□□ -0.67
SLIRP-201ENST00000238688 SP6Q3SY56 376 aa10.86□□□□□ -0.67
SLIRP-201ENST00000238688 LINC00311Q8N616 119 aa10.86□□□□□ -0.67
SLIRP-201ENST00000238688 TPRX1Q8N7U7 411 aa10.86□□□□□ -0.67
SLIRP-201ENST00000238688 OR4D5Q8NGN0 318 aa10.86□□□□□ -0.67
SLIRP-201ENST00000238688 OR51H1Q8NH63 302 aa10.86□□□□□ -0.67
SLIRP-201ENST00000238688 ZNF596Q8TC21 504 aa10.86□□□□□ -0.67
SLIRP-201ENST00000238688 PLSCR3Q9NRY6 295 aa10.86□□□□□ -0.67
SLIRP-201ENST00000238688 POMT1Q9Y6A1 747 aa10.86□□□□□ -0.67
SLIRP-201ENST00000238688 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.85□□□□□ -0.674e-15■■■■■ 30.4
SLIRP-201ENST00000238688 IGHV4-30-2A0A087WSY4 118 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 BCL2L11O43521 198 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 F12P00748 615 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-201ENST00000238688 NKX2-1P43699 371 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-201ENST00000238688 P2RY1P47900 373 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 EFNA4P52798 201 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 RAB32Q13637 225 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 DHRS7BQ6IAN0 325 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-201ENST00000238688 SLC25A48Q6ZT89 311 aaKnown RBP10.85□□□□□ -0.67
SLIRP-201ENST00000238688 TCF23Q7RTU1 214 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 ZNF439Q8NDP4 499 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 OR8B3Q8NGG8 313 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 LHFPL5Q8TAF8 219 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 STOML3Q8TAV4 291 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 DCUN1D4Q92564 292 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 NEIL1Q96FI4 390 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-201ENST00000238688 OR8B2Q96RD0 313 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 S1PR3Q99500 378 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 RNF126Q9BV68 326 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 HEXA-AS1Q9H8Q6 139 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 SDHAF2Q9NX18 166 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 GSKIPQ9P0R6 139 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 PSG11Q9UQ72 335 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 MMP24Q9Y5R2 645 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 COL6A5A8TX70 2615 aa10.85□□□□□ -0.67
SLIRP-201ENST00000238688 CUBNO60494 3623 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 A0A1B0GW55 424 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 RNF222A6NCQ9 220 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 DVL1O14640 695 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 DUX4L2P0CJ85 424 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 DUX4L3P0CJ86 424 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 DUX4L4P0CJ87 422 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 DUX4L5P0CJ88 424 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 DUX4L6P0CJ89 424 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 DUX4L7P0CJ90 424 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 RRASP10301 218 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 THBS3P49746 956 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 AKR1C2P52895 323 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 ID3Q02535 119 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 LRRC37A5PQ49AS3 106 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 ZNF680Q8NEM1 530 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 RNASE11Q8TAA1 199 aaKnown RBP10.84□□□□□ -0.67
SLIRP-201ENST00000238688 RFESDQ8TAC1 157 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 RAB40CQ96S21 281 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 ARPC5LQ9BPX5 153 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 DCTN5Q9BTE1 182 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 IFI27L2Q9H2X8 130 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 DCAF16Q9NXF7 216 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 DUX4Q9UBX2 424 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 UBQLN2Q9UHD9 624 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 BOLA1Q9Y3E2 137 aa10.84□□□□□ -0.67
SLIRP-201ENST00000238688 MPTX1A8MV57 137 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 K7EPK0 472 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 ST8SIA5O15466 376 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 GPR137BO60478 399 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 PITX3O75364 302 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 MED6O75586 246 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 HPRT1P00492 218 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 MBPP02686 304 aaPredicted RBP10.83□□□□□ -0.68
SLIRP-201ENST00000238688 TFF1P04155 84 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 GAPDHP04406 335 aaKnown RBP10.83□□□□□ -0.68
SLIRP-201ENST00000238688 SELLP14151 372 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 IL3RAP26951 378 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 DUTP33316 252 aaKnown RBP10.83□□□□□ -0.68
SLIRP-201ENST00000238688 ZNF137PP52743 207 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 TAS2R30P59541 319 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 S100A10P60903 97 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 HOXA4Q00056 320 aaPredicted RBP10.83□□□□□ -0.68
SLIRP-201ENST00000238688 BAXQ07812 192 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 EIF5AL1Q6IS14 154 aaKnown RBP10.83□□□□□ -0.68
SLIRP-201ENST00000238688 OR8H1Q8NGG4 311 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 OR4S2Q8NH73 311 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 LRRC20Q8TCA0 184 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 TCTEX1D2Q8WW35 142 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 SLC25A31Q9H0C2 315 aa10.83□□□□□ -0.68
SLIRP-201ENST00000238688 PARP12Q9H0J9 701 aaKnown RBP10.83□□□□□ -0.68
SLIRP-201ENST00000238688 BARX1Q9HBU1 254 aaPredicted RBP10.83□□□□□ -0.68
SLIRP-201ENST00000238688 C17orf98A8MV24 154 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 H0YIZ8 118 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms