RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 CXCL3P19876 107 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 GNLYP22749 145 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 PTGDSP41222 190 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 KLF9Q13886 244 aaPredicted RBP7.89□□□□□ -1.15
GGA3-223ENST00000621870 CTRB2Q6GPI1 263 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 KLHDC3Q9BQ90 382 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 SH2D2AQ9NP31 389 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 SLC45A2Q9UMX9 530 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 HTTP42858 3142 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 LEUTXA8MZ59 168 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 CDS2O95674 445 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 MIDNQ504T8 468 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 C1QL2Q7Z5L3 287 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 SLC25A42Q86VD7 318 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 CALHM1Q8IU99 346 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 DUSP18Q8NEJ0 188 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 OR10G4Q8NGN3 311 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 OR10G9Q8NGN4 311 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 OR10G7Q8NGN6 311 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 FAM222BQ8WU58 562 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 C14orf79Q96F83 325 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 SCMH1Q96GD3 660 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 TLNRD1Q9H1K6 362 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 TRBV5-7A0A0A0MS05 114 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 hCG_38984A0A1B0GV85 526 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 ZNF716A6NP11 495 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 EFNA2O43921 213 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 DYNLT3P51808 116 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 UNQ5815/PRO19632Q6UWF5 114 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 ASB13Q8WXK3 278 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 SLC25A38Q96DW6 304 aa7.89□□□□□ -1.15
GGA3-223ENST00000621870 METTL1Q9UBP6 276 aaKnown RBP7.89□□□□□ -1.15
GGA3-223ENST00000621870 IGHV3-35A0A0C4DH35 117 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 C17orf100A8MU93 164 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 MMP7P09237 267 aaPredicted RBP7.88□□□□□ -1.15
GGA3-223ENST00000621870 MUC1P15941 1255 aaPredicted RBP7.88□□□□□ -1.15
GGA3-223ENST00000621870 TFPI2P48307 235 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 FGF8P55075 233 aaPredicted RBP7.88□□□□□ -1.15
GGA3-223ENST00000621870 LOXL3P58215 753 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 ERVFC1-1P60608 527 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 OR9G1Q8NH87 305 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 CABLES2Q9BTV7 478 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 CHRDL1Q9BU40 450 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 PPP1R3EQ9H7J1 279 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 MST1P26927 711 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 IL24Q13007 206 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 ABLIM2Q6H8Q1 611 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 OR10Z1Q8NGY1 313 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 OR4X1Q8NH49 305 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 FBLIM1Q8WUP2 373 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 OR5P3Q8WZ94 311 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 AQP3Q92482 292 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 MRPL13Q9BYD1 178 aaKnown RBP7.88□□□□□ -1.15
GGA3-223ENST00000621870 IDI2-AS1Q9NZ38 188 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 VSIG4Q9Y279 399 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 WSB1Q9Y6I7 421 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 TP53BP1Q12888 1972 aaPredicted RBP7.88□□□□□ -1.15
GGA3-223ENST00000621870 HPRT1P00492 218 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 SMIM17P0DL12 118 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 LINC00114Q6XXX2 140 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 REPIN1Q9BWE0 567 aaKnown RBP7.88□□□□□ -1.15
GGA3-223ENST00000621870 CLEC7AQ9BXN2 247 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 OR51I2Q9H344 312 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 C7orf69Q9H7B7 122 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 ZNF107Q9UII5 783 aaPredicted RBP7.88□□□□□ -1.15
GGA3-223ENST00000621870 OR51B2Q9Y5P1 312 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 TNCP24821 2201 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 PRUNE2Q8WUY3 3088 aa7.88□□□□□ -1.15
GGA3-223ENST00000621870 CDRT15L2A8MXV6 281 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 TMEM50BP56557 158 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 UNC119Q13432 240 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 ATP6V1FQ16864 119 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 OVCH2Q7RTZ1 564 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 MMD2Q8IY49 270 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 EAF1Q96JC9 268 aaPredicted RBP7.87□□□□□ -1.15
GGA3-223ENST00000621870 Q96M66 194 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 MS4A10Q96PG2 267 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 IGLV3-32A0A0A0MS00 114 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 LOC390937A0A1W2PQ73 354 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 H0YL77 283 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 OR2C1O95371 312 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 NTF3P20783 257 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 B2MP61769 119 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 RPL8P62917 257 aaKnown RBP7.87□□□□□ -1.15
GGA3-223ENST00000621870 H3F3AP84243 136 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 PRB3Q04118 309 aaPredicted RBP7.87□□□□□ -1.15
GGA3-223ENST00000621870 FDX2Q6P4F2 183 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 CD200R1LQ6Q8B3 271 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 Q6ZS92 163 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 STARD4Q96DR4 205 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 NXF2Q9GZY0 626 aaKnown RBP7.87□□□□□ -1.15
GGA3-223ENST00000621870 RHOFQ9HBH0 211 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 WASHC3Q9Y3C0 194 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 FAM90A10PA6NDY2 464 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 FAM90A18PA6NE21 464 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 FAM90A16PA6NEW6 464 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 FAM90A20PA6NIJ5 464 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 FAM90A8PA6NJQ4 464 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 FAM90A7PA6NKC0 464 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 FAM90A22PA8MWA6 464 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms