RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 TMEM183BQ1AE95 376 aa9.14□□□□□ -0.95
CDH1-214ENST00000621016 C10orf128Q5T292 105 aa9.14□□□□□ -0.95
CDH1-214ENST00000621016 BOD1Q96IK1 185 aa9.14□□□□□ -0.95
CDH1-214ENST00000621016 PILRBQ9UKJ0 227 aa9.14□□□□□ -0.95
CDH1-214ENST00000621016 BORCS7-ASMTA0A0B4J1R7 106 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 A0A0U1RQK1 487 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 ETV2O00321 342 aaPredicted RBP9.13□□□□□ -0.95
CDH1-214ENST00000621016 TNFSF13O75888 250 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 SRP19P09132 144 aaKnown RBP9.13□□□□□ -0.95
CDH1-214ENST00000621016 PPOXP50336 477 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 CRYBA4P53673 196 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 FAM3BP58499 235 aaPredicted RBP9.13□□□□□ -0.95
CDH1-214ENST00000621016 IL11RAQ14626 422 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 LINC01551Q86U37 167 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 SSC4DQ8WTU2 575 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 PIEZO2Q9H5I5 2752 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 TRDCB7Z8K6 153 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 ADAM20O43506 726 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 ZNF207O43670 478 aaKnown RBP9.13□□□□□ -0.95
CDH1-214ENST00000621016 DKK1O94907 266 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 PLA2G5P39877 138 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 RPS16P62249 146 aaKnown RBP9.13□□□□□ -0.95
CDH1-214ENST00000621016 HIST1H3AP68431 136 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 AMMECR1LQ6DCA0 310 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 MRPL21Q7Z2W9 205 aaKnown RBP9.13□□□□□ -0.95
CDH1-214ENST00000621016 GAPTQ8N292 157 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 TMEM186Q96B77 213 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 SPSB1Q96BD6 273 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 PLSCR4Q9NRQ2 329 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 ATMQ13315 3056 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 ZNF732B4DXR9 585 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 PPYP01298 95 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 DANCRP0C864 163 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 MC5RP33032 325 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 TMEM187Q14656 261 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 HIKESHIQ53FT3 197 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 TMEM41BQ5BJD5 291 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 PMS2CLQ68D20 193 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 OR2G3Q8NGZ4 309 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 OR2V1Q8NHB1 315 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 ST6GALNAC6Q969X2 333 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 TM2D1Q9BX74 207 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 CCL28Q9NRJ3 127 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 SLC45A2Q9UMX9 530 aa9.13□□□□□ -0.95
CDH1-214ENST00000621016 OR2T8A6NH00 312 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 VSTM5A8MXK1 200 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 LAMTOR5O43504 91 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 SYNGR1O43759 233 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 SPATA45Q537H7 98 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 Q6ZPA2 131 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 TBC1D26Q86UD7 250 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 LGI3Q8N145 548 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 SMIM12Q96EX1 92 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 NSG2Q9Y328 171 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 IGHV2-70DA0A0C4DH43 119 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 C3orf85A0A1B0GTC6 90 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 GJE1A6NN92 205 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 FOXI3A8MTJ6 420 aaPredicted RBP9.12□□□□□ -0.95
CDH1-214ENST00000621016 LILRA1O75019 489 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 PDCD6O75340 191 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 CRYGSP22914 178 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 GCH1P30793 250 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 PLGLB1Q02325 96 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 LIAT1Q6ZQX7 453 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.12□□□□□ -0.95
CDH1-214ENST00000621016 GGNQ86UU5 652 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 OR4D5Q8NGN0 318 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 DMXL2Q8TDJ6 3036 aa9.12□□□□□ -0.95
CDH1-214ENST00000621016 IGHV2OR16-5A0A0B4J2B6 119 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 OTX1P32242 354 aaPredicted RBP9.11□□□□□ -0.95
CDH1-214ENST00000621016 MAGEA5P43359 124 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 TAS2R30P59541 319 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 IL15RAQ13261 267 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 LHFPL2Q6ZUX7 228 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 Q6ZWC4 215 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 OR10W1Q8NGF6 305 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 OR5C1Q8NGR4 320 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 NAA38Q9BRA0 125 aaKnown RBP9.11□□□□□ -0.95
CDH1-214ENST00000621016 NUDT16L1Q9BRJ7 211 aaKnown RBP9.11□□□□□ -0.95
CDH1-214ENST00000621016 SAMD10Q9BYL1 202 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 RBKSQ9H477 322 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 IGKV1D-13A0A0B4J2D9 117 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 ZNF716A6NP11 495 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 SH2D1BO14796 132 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 IGKV1-13P0DP09 117 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 PRDX4Q13162 271 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 DCAF12Q5T6F0 453 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 SIGLEC12Q96PQ1 595 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 ZNF816-ZNF321PA0A0X1KG74 233 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 ZNF503-AS2A6NEH8 195 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 CEACAM18A8MTB9 384 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 MPPED1O15442 326 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 FUT6P51993 359 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 RBM11P57052 281 aaKnown RBP9.11□□□□□ -0.95
CDH1-214ENST00000621016 ZNF154Q13106 437 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 TMEM177Q53S58 311 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 ZNF818PQ6ZRF7 136 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 C16orf82Q7Z2V1 217 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 PPP1R32Q7Z5V6 425 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 RNF138Q8WVD3 245 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms