RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 MS4A3Q96HJ5 214 aa10.95□□□□□ -0.66
DNMT1-228ENST00000592705 IGHV3-13P01766 116 aa10.95□□□□□ -0.66
DNMT1-228ENST00000592705 IGHV3-7P01780 117 aa10.95□□□□□ -0.66
DNMT1-228ENST00000592705 SPCS3P61009 180 aa10.95□□□□□ -0.66
DNMT1-228ENST00000592705 SAXO1Q8IYX7 474 aa10.95□□□□□ -0.66
DNMT1-228ENST00000592705 NHLRC2Q8NBF2 726 aa10.95□□□□□ -0.66
DNMT1-228ENST00000592705 LOC102723971A0A1B0GUV8 181 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 LOC390937A0A1W2PQ73 354 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 TOX4O94842 621 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 AMTP48728 403 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 TNFSF10P50591 281 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 EFNB1P98172 346 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 HLA-DRB5Q30154 266 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 C10orf128Q5T292 105 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 LINC00518Q8N0U6 118 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 SSMEM1Q8WWF3 244 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 MSL2Q9HCI7 577 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 INSIG2Q9Y5U4 225 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 PF4V1P10720 104 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 B2MP61769 119 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 PAFAH1B2P68402 229 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 TMEM187Q14656 261 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 RIPPLY2Q5TAB7 128 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 DHRS7BQ6IAN0 325 aaPredicted RBP10.94□□□□□ -0.66
DNMT1-228ENST00000592705 CRIPAKQ8N1N5 446 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 ZNF596Q8TC21 504 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 RNASE6Q93091 150 aaKnown RBP10.94□□□□□ -0.66
DNMT1-228ENST00000592705 PGLYRP1O75594 196 aaPredicted RBP10.94□□□□□ -0.66
DNMT1-228ENST00000592705 AESQ08117 197 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 TEPPQ6URK8 271 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 OR1L6Q8NGR2 347 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 FAM168AQ92567 244 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 SYNGR1O43759 233 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 OR10J1P30954 320 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 UNC119Q13432 240 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 CXorf66Q5JRM2 361 aaPredicted RBP10.94□□□□□ -0.66
DNMT1-228ENST00000592705 TMEM54Q969K7 222 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 P2RX4Q99571 388 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 DOK5Q9P104 306 aa10.94□□□□□ -0.66
DNMT1-228ENST00000592705 SRSF10O75494 262 aaKnown RBP10.93□□□□□ -0.66
DNMT1-228ENST00000592705 PDPNQ86YL7 162 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 OR52M1Q8NGK5 317 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 BLNKQ8WV28 456 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 SYNGR3O43761 229 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 LYPD3O95274 346 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 USF1P22415 310 aaPredicted RBP10.93□□□□□ -0.66
DNMT1-228ENST00000592705 SUCLG1P53597 346 aaKnown RBP10.93□□□□□ -0.66
DNMT1-228ENST00000592705 GAS1P54826 345 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 TGIF2LYQ8IUE0 185 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 TGIF2LXQ8IUE1 241 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 POM121Q96HA1 1249 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 OR2J1Q9GZK6 312 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 COA4Q9NYJ1 87 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 ZDHHC8Q9ULC8 765 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 CXorf65A6NEN9 183 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 LRRC3CA6NJW4 275 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 ZNF253O75346 499 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 HPRT1P00492 218 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 BDP1A6H8Y1 2624 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 M0QZK8 103 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 GGCTO75223 188 aaKnown RBP10.93□□□□□ -0.66
DNMT1-228ENST00000592705 TGFAP01135 160 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 NPY1RP25929 384 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 CD1BP29016 333 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 VPS25Q9BRG1 176 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 TMEM204Q9BSN7 226 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 RSG1Q9BU20 258 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 PRDM14Q9GZV8 571 aa10.93□□□□□ -0.66
DNMT1-228ENST00000592705 HELTA6NFD8 242 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 TGFBR3LH3BV60 316 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 ZNF708P17019 499 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 PPP1CCP36873 323 aaKnown RBP10.92□□□□□ -0.66
DNMT1-228ENST00000592705 OR5AU1Q8NGC0 362 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 PKIBQ9C010 78 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 CARHSP1Q9Y2V2 147 aaKnown RBP10.92□□□□□ -0.66
DNMT1-228ENST00000592705 IGKV3D-11A0A0A0MRZ8 115 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 RPL31P62899 125 aaKnown RBP10.92□□□□□ -0.66
DNMT1-228ENST00000592705 OR52L2PQ8NGH6 319 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 SLC25A10Q9UBX3 287 aaPredicted RBP10.92□□□□□ -0.66
DNMT1-228ENST00000592705 IL19Q9UHD0 177 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 FAM90A26D6RGX4 464 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 C2orf68Q2NKX9 166 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 LRP11Q86VZ4 500 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 AKAP6Q13023 2319 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 CHD5Q8TDI0 1954 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 DHRS11Q6UWP2 260 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 ZNF645Q8N7E2 425 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 GPR146Q96CH1 333 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 TXNDC17Q9BRA2 123 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 TET1Q8NFU7 2136 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 E9PLN8 166 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 MPDU1O75352 247 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 TIAF1O95411 115 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 FAM157CP0CG43 387 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 COX5BP10606 129 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 IGFBP3P17936 291 aaPredicted RBP10.92□□□□□ -0.66
DNMT1-228ENST00000592705 ORM2P19652 201 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 HTR1DP28221 377 aa10.92□□□□□ -0.66
DNMT1-228ENST00000592705 APOBEC3AP31941 199 aaPredicted RBP10.92□□□□□ -0.66
DNMT1-228ENST00000592705 NBL1P41271 181 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms