RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 MEIS3P1A6NDR6 274 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 FAM90A18PA6NE21 464 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 FAM90A16PA6NEW6 464 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 TMEM235A6NFC5 223 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 LIPT2A6NK58 231 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 ZNF98A6NK75 572 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 OR2AT4A6NND4 320 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 FAM90A9PA6NNJ1 464 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 FOXI3A8MTJ6 420 aaPredicted RBP6.23□□□□□ -1.41
SMAD4-209ENST00000589941 FAM90A5PA8MXJ8 464 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 SLC16A7O60669 478 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 EIF1BO60739 113 aaKnown RBP6.23□□□□□ -1.41
SMAD4-209ENST00000589941 SFT2D2O95562 160 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 IFNA4P05014 189 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 SPARCP09486 303 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 FAM90A15PP0C7V4 464 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 FAM90A14PP0C7W9 464 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 MMP9P14780 707 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 B4GALT1P15291 398 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 PRKACAP17612 351 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 CCL1P22362 96 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 CXCR1P25024 350 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 CFHR2P36980 270 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 MPV17P39210 176 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 APOBEC1P41238 236 aaKnown RBP6.23□□□□□ -1.41
SMAD4-209ENST00000589941 RPS27P42677 84 aaKnown RBP6.23□□□□□ -1.41
SMAD4-209ENST00000589941 PRKXP51817 358 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 PJVKQ0ZLH3 352 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 EIF2B1Q14232 305 aaKnown RBP6.23□□□□□ -1.41
SMAD4-209ENST00000589941 OR7A5Q15622 319 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 TMEM155Q4W5P6 130 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 SPATA46Q5T0L3 261 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 C1orf140Q5VVS0 124 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 PRSS54Q6PEW0 395 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 Q6ZSR3 168 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 SLC35D2Q76EJ3 337 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 TMED4Q7Z7H5 227 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 SKA3Q8IX90 412 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 BAP18Q8IXM2 172 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 SPAG16Q8N0X2 631 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 KDM8Q8N371 416 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 SLC22A24Q8N4F4 322 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 ADPRHL1Q8NDY3 354 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 WFDC9Q8NEX5 89 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 OR4A4PQ8NGN8 299 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 OR8S1Q8NH09 359 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 LYPD6BQ8NI32 183 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 THAP6Q8TBB0 222 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 TMEM230Q96A57 120 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 NAA11Q9BSU3 229 aaPredicted RBP6.23□□□□□ -1.41
SMAD4-209ENST00000589941 SF3B5Q9BWJ5 86 aaKnown RBP6.23□□□□□ -1.41
SMAD4-209ENST00000589941 ZNF471Q9BX82 626 aaPredicted RBP6.23□□□□□ -1.41
SMAD4-209ENST00000589941 MOB1AQ9H8S9 216 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 CHMP1AQ9HD42 196 aaPredicted RBP6.23□□□□□ -1.41
SMAD4-209ENST00000589941 ZNRD1Q9P1U0 126 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 GPR132Q9UNW8 380 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 TMED7Q9Y3B3 224 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 KMT2AQ03164 3969 aa6.23□□□□□ -1.41
SMAD4-209ENST00000589941 IGHV1-69DA0A0B4J2H0 117 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 KIR2DS1A0A191URI9 304 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 MS4A18H0YCH9 400 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 H7C2Y5 167 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 GPR31O00270 319 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 MFNGO00587 321 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 ZNF208O43345 1280 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 OR6A2O95222 327 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 IGHV1-69P01742 117 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 TTRP02766 147 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 FCER2P06734 321 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 WNT2P09544 360 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 RPS2P15880 293 aaKnown RBP6.22□□□□□ -1.41
SMAD4-209ENST00000589941 LMO1P25800 156 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 CBX5P45973 191 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 UCP2P55851 309 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 CLDN17P56750 224 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 DEFA5Q01523 94 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 PRB3Q04118 309 aaPredicted RBP6.22□□□□□ -1.41
SMAD4-209ENST00000589941 SURF2Q15527 256 aaPredicted RBP6.22□□□□□ -1.41
SMAD4-209ENST00000589941 MS4A18Q3C1V0 323 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 CDNFQ49AH0 187 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 TMEM128Q5BJH2 165 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 C10orf25Q5T742 122 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 TRAPPC6BQ86SZ2 158 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 NAA40Q86UY6 237 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 OR5AS1Q8N127 324 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 FAM89BQ8N5H3 189 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 POC1AQ8NBT0 407 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 INO80EQ8NBZ0 244 aaPredicted RBP6.22□□□□□ -1.41
SMAD4-209ENST00000589941 Q8NFD4 153 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 OR1M1Q8NGA1 313 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 OR4F17Q8NGA8 305 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 OR13C3Q8NGS6 347 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 OR10R2Q8NGX6 335 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 MFSD8Q8NHS3 518 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 ZNF563Q8TA94 476 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 TMEM234Q8WY98 164 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 RCHY1Q96PM5 261 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 OR4F4Q96R69 305 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 TSNAXQ99598 290 aaKnown RBP6.22□□□□□ -1.41
SMAD4-209ENST00000589941 LPAR5Q9H1C0 372 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms