RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 GINS4Q9BRT9 223 aa12.32□□□□□ -0.44
RABGGTA-219ENST00000560871 OR2D2Q9H210 308 aa12.32□□□□□ -0.44
RABGGTA-219ENST00000560871 MIXL1Q9H2W2 232 aa12.32□□□□□ -0.44
RABGGTA-219ENST00000560871 PLSCR3Q9NRY6 295 aa12.32□□□□□ -0.44
RABGGTA-219ENST00000560871 GAB2Q9UQC2 676 aa12.32□□□□□ -0.44
RABGGTA-219ENST00000560871 MEIS3P1A6NDR6 274 aa12.31□□□□□ -0.44
RABGGTA-219ENST00000560871 SH2D7A6NKC9 451 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-219ENST00000560871 OR8U9P0C7N5 309 aa12.31□□□□□ -0.44
RABGGTA-219ENST00000560871 GPR12P47775 334 aa12.31□□□□□ -0.44
RABGGTA-219ENST00000560871 OR8U1Q8NH10 309 aa12.31□□□□□ -0.44
RABGGTA-219ENST00000560871 WIPF2Q8TF74 440 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-219ENST00000560871 SLIRPQ9GZT3 109 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-219ENST00000560871 WNT10AQ9GZT5 417 aa12.31□□□□□ -0.44
RABGGTA-219ENST00000560871 SDHAF2Q9NX18 166 aa12.31□□□□□ -0.44
RABGGTA-219ENST00000560871 ZNF221Q9UK13 617 aa12.31□□□□□ -0.44
RABGGTA-219ENST00000560871 RNF150Q9ULK6 438 aa12.31□□□□□ -0.44
RABGGTA-219ENST00000560871 OR5H14A6NHG9 310 aa12.3□□□□□ -0.44
RABGGTA-219ENST00000560871 H0YJW9 148 aa12.3□□□□□ -0.44
RABGGTA-219ENST00000560871 TUSC2O75896 110 aa12.3□□□□□ -0.44
RABGGTA-219ENST00000560871 NFYAP23511 347 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-219ENST00000560871 FAM131AQ6UXB0 335 aa12.3□□□□□ -0.44
RABGGTA-219ENST00000560871 GLDNQ6ZMI3 551 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-219ENST00000560871 LAX1Q8IWV1 398 aa12.3□□□□□ -0.44
RABGGTA-219ENST00000560871 FAM71E2Q8N5Q1 922 aa12.3□□□□□ -0.44
RABGGTA-219ENST00000560871 KLHDC1Q8N7A1 406 aa12.3□□□□□ -0.44
RABGGTA-219ENST00000560871 Q8N9W7 124 aa12.3□□□□□ -0.44
RABGGTA-219ENST00000560871 OR8H1Q8NGG4 311 aa12.3□□□□□ -0.44
RABGGTA-219ENST00000560871 OR5AN1Q8NGI8 311 aa12.3□□□□□ -0.44
RABGGTA-219ENST00000560871 GPX8Q8TED1 209 aa12.3□□□□□ -0.44
RABGGTA-219ENST00000560871 ADAM30Q9UKF2 790 aa12.3□□□□□ -0.44
RABGGTA-219ENST00000560871 TRRAPQ9Y4A5 3859 aa12.29□□□□□ -0.44
RABGGTA-219ENST00000560871 FAM25AB3EWG3 89 aa12.29□□□□□ -0.44
RABGGTA-219ENST00000560871 FAM25CB3EWG5 89 aa12.29□□□□□ -0.44
RABGGTA-219ENST00000560871 FAM25GB3EWG6 89 aa12.29□□□□□ -0.44
RABGGTA-219ENST00000560871 FCER2P06734 321 aa12.29□□□□□ -0.44
RABGGTA-219ENST00000560871 NAT1P18440 290 aa12.29□□□□□ -0.44
RABGGTA-219ENST00000560871 PRSS3P35030 304 aa12.29□□□□□ -0.44
RABGGTA-219ENST00000560871 VDAC2P45880 294 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-219ENST00000560871 LINC00205P59089 165 aa12.29□□□□□ -0.44
RABGGTA-219ENST00000560871 ARPC4P59998 168 aa12.29□□□□□ -0.44
RABGGTA-219ENST00000560871 ZNF383Q8NA42 475 aa12.29□□□□□ -0.44
RABGGTA-219ENST00000560871 SCPEP1Q9HB40 452 aa12.29□□□□□ -0.44
RABGGTA-219ENST00000560871 IFT46Q9NQC8 304 aa12.29□□□□□ -0.44
RABGGTA-219ENST00000560871 EXTL2Q9UBQ6 330 aa12.29□□□□□ -0.44
RABGGTA-219ENST00000560871 OR2W1Q9Y3N9 320 aa12.29□□□□□ -0.44
RABGGTA-219ENST00000560871 IGKV1D-13A0A0B4J2D9 117 aa12.28□□□□□ -0.44
RABGGTA-219ENST00000560871 SMIM31A0A1B0GVY4 71 aa12.28□□□□□ -0.44
RABGGTA-219ENST00000560871 CTDSP2O14595 271 aa12.28□□□□□ -0.44
RABGGTA-219ENST00000560871 IGKV1-13P0DP09 117 aa12.28□□□□□ -0.44
RABGGTA-219ENST00000560871 F2RL1P55085 397 aa12.28□□□□□ -0.44
RABGGTA-219ENST00000560871 ACTBP60709 375 aa12.28□□□□□ -0.44
RABGGTA-219ENST00000560871 SNX29P2Q8IUI4 249 aa12.28□□□□□ -0.44
RABGGTA-219ENST00000560871 DRAXINQ8NBI3 349 aaPredicted RBP12.28□□□□□ -0.44
RABGGTA-219ENST00000560871 OR5AP2Q8NGF4 316 aa12.28□□□□□ -0.44
RABGGTA-219ENST00000560871 RITA1Q96K30 269 aa12.28□□□□□ -0.44
RABGGTA-219ENST00000560871 NXF2Q9GZY0 626 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-219ENST00000560871 LIN7CQ9NUP9 197 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-219ENST00000560871 NECAP2Q9NVZ3 263 aa12.28□□□□□ -0.44
RABGGTA-219ENST00000560871 MRPS7Q9Y2R9 242 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-219ENST00000560871 NCBP2LA6PVI3 153 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-219ENST00000560871 M0QZ24 198 aa12.27□□□□□ -0.45
RABGGTA-219ENST00000560871 ZNF701M0R085 212 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-219ENST00000560871 M0R1X1 148 aa12.27□□□□□ -0.45
RABGGTA-219ENST00000560871 SULT1C2O00338 296 aa12.27□□□□□ -0.45
RABGGTA-219ENST00000560871 TPPPO94811 219 aa12.27□□□□□ -0.45
RABGGTA-219ENST00000560871 NDUFA3O95167 84 aa12.27□□□□□ -0.45
RABGGTA-219ENST00000560871 IGLV2-14P01704 120 aa12.27□□□□□ -0.45
RABGGTA-219ENST00000560871 CNTFRP26992 372 aa12.27□□□□□ -0.45
RABGGTA-219ENST00000560871 LUMP51884 338 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-219ENST00000560871 CDK10Q15131 360 aa12.27□□□□□ -0.45
RABGGTA-219ENST00000560871 MMDQ15546 238 aa12.27□□□□□ -0.45
RABGGTA-219ENST00000560871 ARSJQ5FYB0 599 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-219ENST00000560871 ZNF645Q8N7E2 425 aa12.27□□□□□ -0.45
RABGGTA-219ENST00000560871 RSL24D1Q9UHA3 163 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-219ENST00000560871 WASHC3Q9Y3C0 194 aa12.27□□□□□ -0.45
RABGGTA-219ENST00000560871 RBM7Q9Y580 266 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-219ENST00000560871 CCDC160A6NGH7 325 aa12.26□□□□□ -0.45
RABGGTA-219ENST00000560871 RGS5O15539 181 aa12.26□□□□□ -0.45
RABGGTA-219ENST00000560871 WIPF1O43516 503 aa12.26□□□□□ -0.45
RABGGTA-219ENST00000560871 IGHG2P01859 326 aa12.26□□□□□ -0.45
RABGGTA-219ENST00000560871 OR5H8P0DN80 308 aa12.26□□□□□ -0.45
RABGGTA-219ENST00000560871 VSIG10L2P0DP72 767 aa12.26□□□□□ -0.45
RABGGTA-219ENST00000560871 FCGR2CP31995 323 aa12.26□□□□□ -0.45
RABGGTA-219ENST00000560871 MC5RP33032 325 aa12.26□□□□□ -0.45
RABGGTA-219ENST00000560871 C9orf152Q5JTZ5 239 aa12.26□□□□□ -0.45
RABGGTA-219ENST00000560871 ZNF660Q6AZW8 331 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-219ENST00000560871 OVCH2Q7RTZ1 564 aa12.26□□□□□ -0.45
RABGGTA-219ENST00000560871 PDPNQ86YL7 162 aa12.26□□□□□ -0.45
RABGGTA-219ENST00000560871 NPBQ8NG41 125 aa12.26□□□□□ -0.45
RABGGTA-219ENST00000560871 DDB2Q92466 427 aa12.26□□□□□ -0.45
RABGGTA-219ENST00000560871 ABHD1Q96SE0 405 aa12.26□□□□□ -0.45
RABGGTA-219ENST00000560871 TET2Q6N021 2002 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-219ENST00000560871 MGAM2Q2M2H8 2515 aa12.26□□□□□ -0.45
RABGGTA-219ENST00000560871 J3QRK9 145 aa12.25□□□□□ -0.45
RABGGTA-219ENST00000560871 NBR2O15453 112 aa12.25□□□□□ -0.45
RABGGTA-219ENST00000560871 RBBP9O75884 186 aa12.25□□□□□ -0.45
RABGGTA-219ENST00000560871 PPYP01298 95 aa12.25□□□□□ -0.45
RABGGTA-219ENST00000560871 IGKV1-16P04430 117 aa12.25□□□□□ -0.45
RABGGTA-219ENST00000560871 AADACP22760 399 aa12.25□□□□□ -0.45
RABGGTA-219ENST00000560871 DUTP33316 252 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms