RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 BET1O15155 118 aa16.61■□□□□ 0.25
PSEN1-225ENST00000560005 HSPA12AO43301 675 aa16.61■□□□□ 0.25
PSEN1-225ENST00000560005 NDUFB3O43676 98 aa16.61■□□□□ 0.25
PSEN1-225ENST00000560005 CCNKO75909 580 aa16.61■□□□□ 0.25
PSEN1-225ENST00000560005 PPYP01298 95 aa16.61■□□□□ 0.25
PSEN1-225ENST00000560005 ZBTB25P24278 435 aa16.61■□□□□ 0.25
PSEN1-225ENST00000560005 S100GP29377 79 aa16.61■□□□□ 0.25
PSEN1-225ENST00000560005 LRRC10Q5BKY1 277 aa16.61■□□□□ 0.25
PSEN1-225ENST00000560005 IGSF11Q5DX21 431 aa16.61■□□□□ 0.25
PSEN1-225ENST00000560005 FAM185AQ8N0U4 392 aa16.61■□□□□ 0.25
PSEN1-225ENST00000560005 ZNRF1Q8ND25 227 aa16.61■□□□□ 0.25
PSEN1-225ENST00000560005 ZNF431Q8TF32 576 aaPredicted RBP16.61■□□□□ 0.25
PSEN1-225ENST00000560005 MRGPRFQ96AM1 343 aa16.61■□□□□ 0.25
PSEN1-225ENST00000560005 CCL13Q99616 98 aa16.61■□□□□ 0.25
PSEN1-225ENST00000560005 NEURL2Q9BR09 285 aa16.61■□□□□ 0.25
PSEN1-225ENST00000560005 TUSC2O75896 110 aa16.6■□□□□ 0.25
PSEN1-225ENST00000560005 VSIG10L2P0DP72 767 aa16.6■□□□□ 0.25
PSEN1-225ENST00000560005 GLIPR1P48060 266 aa16.6■□□□□ 0.25
PSEN1-225ENST00000560005 DHODHQ02127 395 aa16.6■□□□□ 0.25
PSEN1-225ENST00000560005 PRB3Q04118 309 aaPredicted RBP16.6■□□□□ 0.25
PSEN1-225ENST00000560005 MEF2CQ06413 473 aaPredicted RBP16.6■□□□□ 0.25
PSEN1-225ENST00000560005 TMEM30BQ3MIR4 351 aa16.6■□□□□ 0.25
PSEN1-225ENST00000560005 ABCA11PQ4W5N1 156 aa16.6■□□□□ 0.25
PSEN1-225ENST00000560005 C1orf122Q6ZSJ8 110 aa16.6■□□□□ 0.25
PSEN1-225ENST00000560005 CCDC71LQ8N9Z2 235 aa16.6■□□□□ 0.25
PSEN1-225ENST00000560005 CFHR4Q92496 578 aa16.6■□□□□ 0.25
PSEN1-225ENST00000560005 KPTNQ9Y664 436 aa16.6■□□□□ 0.25
PSEN1-225ENST00000560005 TRGV10A0A0A0MS01 117 aa16.59■□□□□ 0.25
PSEN1-225ENST00000560005 DVL1O14640 695 aa16.59■□□□□ 0.25
PSEN1-225ENST00000560005 EDDM3BP56851 147 aa16.59■□□□□ 0.25
PSEN1-225ENST00000560005 HTD2P86397 168 aa16.59■□□□□ 0.25
PSEN1-225ENST00000560005 EDDM3AQ14507 147 aa16.59■□□□□ 0.25
PSEN1-225ENST00000560005 C11orf87Q6NUJ2 197 aa16.59■□□□□ 0.25
PSEN1-225ENST00000560005 LYG2Q86SG7 212 aa16.59■□□□□ 0.25
PSEN1-225ENST00000560005 H1FOOQ8IZA3 346 aaPredicted RBP16.59■□□□□ 0.25
PSEN1-225ENST00000560005 IL1F10Q8WWZ1 152 aa16.59■□□□□ 0.25
PSEN1-225ENST00000560005 TOLLIPQ9H0E2 274 aa16.59■□□□□ 0.25
PSEN1-225ENST00000560005 C5orf66Q9H5L9 145 aa16.59■□□□□ 0.25
PSEN1-225ENST00000560005 ONECUT1Q9UBC0 465 aa16.59■□□□□ 0.25
PSEN1-225ENST00000560005 SLC25A10Q9UBX3 287 aaPredicted RBP16.59■□□□□ 0.25
PSEN1-225ENST00000560005 RPUSD1Q9UJJ7 312 aaKnown RBP16.59■□□□□ 0.25
PSEN1-225ENST00000560005 KCNIP3Q9Y2W7 256 aa16.59■□□□□ 0.25
PSEN1-225ENST00000560005 OR2W1Q9Y3N9 320 aa16.59■□□□□ 0.25
PSEN1-225ENST00000560005 A0A1W2PRD5 423 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 A0A1W2PRF3 423 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 A0A1W2PRM7 423 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 hADV38S2A0JD32 116 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 RNASEK-C17orf49H0YIS7 233 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 AKR1C4P17516 323 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 AADACP22760 399 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 NFYAP23511 347 aaPredicted RBP16.58■□□□□ 0.24
PSEN1-225ENST00000560005 SGPP2Q8IWX5 399 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 LYG1Q8N1E2 194 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 FGFRL1Q8N441 504 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 KLHDC1Q8N7A1 406 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 OR5R1Q8NH85 324 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 MRGPRDQ8TDS7 321 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 CORO2AQ92828 525 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 ARL11Q969Q4 196 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 SEC22CQ9BRL7 303 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 RTBDNQ9BSG5 229 aaPredicted RBP16.58■□□□□ 0.24
PSEN1-225ENST00000560005 RSRP1Q9BUV0 290 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 SIRT7Q9NRC8 400 aa16.58■□□□□ 0.24
PSEN1-225ENST00000560005 A0A0B4J2A0 478 aa16.57■□□□□ 0.24
PSEN1-225ENST00000560005 IGKV1-6A0A0C4DH72 117 aa16.57■□□□□ 0.24
PSEN1-225ENST00000560005 C12orf77C9JDV5 145 aa16.57■□□□□ 0.24
PSEN1-225ENST00000560005 HLA-AP01891 365 aaKnown RBP16.57■□□□□ 0.24
PSEN1-225ENST00000560005 HBZP02008 142 aa16.57■□□□□ 0.24
PSEN1-225ENST00000560005 TFF1P04155 84 aa16.57■□□□□ 0.24
PSEN1-225ENST00000560005 ANXA3P12429 323 aa16.57■□□□□ 0.24
PSEN1-225ENST00000560005 FXYD4P59646 89 aa16.57■□□□□ 0.24
PSEN1-225ENST00000560005 DHRS2Q13268 280 aa16.57■□□□□ 0.24
PSEN1-225ENST00000560005 C12orf45Q8N5I9 185 aaPredicted RBP16.57■□□□□ 0.24
PSEN1-225ENST00000560005 ASB13Q8WXK3 278 aa16.57■□□□□ 0.24
PSEN1-225ENST00000560005 TOMM40LQ969M1 308 aa16.57■□□□□ 0.24
PSEN1-225ENST00000560005 PHB2Q99623 299 aa16.57■□□□□ 0.24
PSEN1-225ENST00000560005 SHPKQ9UHJ6 478 aa16.57■□□□□ 0.24
PSEN1-225ENST00000560005 UBE2J1Q9Y385 318 aaPredicted RBP16.57■□□□□ 0.24
PSEN1-225ENST00000560005 PIGBOS1A0A0B4J2F0 54 aa16.56■□□□□ 0.24
PSEN1-225ENST00000560005 C9orf170A2RU37 121 aa16.56■□□□□ 0.24
PSEN1-225ENST00000560005 ZNF729A6NN14 1252 aaPredicted RBP16.56■□□□□ 0.24
PSEN1-225ENST00000560005 NPFFO15130 113 aa16.56■□□□□ 0.24
PSEN1-225ENST00000560005 SLC22A5O76082 557 aa16.56■□□□□ 0.24
PSEN1-225ENST00000560005 RGS11O94810 467 aa16.56■□□□□ 0.24
PSEN1-225ENST00000560005 DUS4LO95620 317 aaKnown RBP16.56■□□□□ 0.24
PSEN1-225ENST00000560005 HNRNPCP07910 306 aaKnown RBP eCLIP16.56■□□□□ 0.24
PSEN1-225ENST00000560005 NDUFB7P17568 137 aa16.56■□□□□ 0.24
PSEN1-225ENST00000560005 LUMP51884 338 aaPredicted RBP16.56■□□□□ 0.24
PSEN1-225ENST00000560005 DLX1P56177 255 aa16.56■□□□□ 0.24
PSEN1-225ENST00000560005 C11orf91Q3C1V1 193 aa16.56■□□□□ 0.24
PSEN1-225ENST00000560005 CMTM1Q8IZ96 169 aa16.56■□□□□ 0.24
PSEN1-225ENST00000560005 FAM216BQ8N7L0 139 aa16.56■□□□□ 0.24
PSEN1-225ENST00000560005 OR13A1Q8NGR1 328 aa16.56■□□□□ 0.24
PSEN1-225ENST00000560005 CAPSLQ8WWF8 208 aa16.56■□□□□ 0.24
PSEN1-225ENST00000560005 AKR1E2Q96JD6 320 aa16.56■□□□□ 0.24
PSEN1-225ENST00000560005 SLC5A7Q9GZV3 580 aa16.56■□□□□ 0.24
PSEN1-225ENST00000560005 FXYD6Q9H0Q3 95 aa16.56■□□□□ 0.24
PSEN1-225ENST00000560005 TAS2R3Q9NYW6 316 aa16.56■□□□□ 0.24
PSEN1-225ENST00000560005 TEX13DA0A0J9YY54 714 aaPredicted RBP16.55■□□□□ 0.24
PSEN1-225ENST00000560005 GPR31O00270 319 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms