RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 WSB1Q9Y6I7 421 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 ENPP4Q9Y6X5 453 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 LOXHD1Q8IVV2 1947 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 UBR1Q8IWV7 1749 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 NRKQ7Z2Y5 1582 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 PXDNQ92626 1479 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 CCDC182A6NF36 153 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 FABP5P3A8MUU1 101 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 D6RAR5 112 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 K7ERU9 68 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF593O00488 134 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 FCN1O00602 326 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 CASKO14936 926 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 GNG7O60262 68 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 SLC16A7O60669 478 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 TRAPPC6AO75865 159 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 CD14P08571 375 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF728P0DKX0 622 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 RPL7P18124 248 aaKnown RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 GGT1P19440 569 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 CNTFRP26992 372 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 GLP1RP43220 463 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 AQP5P55064 265 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 RAB38P57729 211 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 TAS2R30P59541 319 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 UBE2MP61081 183 aaKnown RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 EWSR1Q01844 656 aaKnown RBP eCLIP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 BCL2L1Q07817 233 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 KHDC3LQ587J8 217 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 COL5A1-AS1Q5SY13 56 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 KCNIP4Q6PIL6 250 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 OPN5Q6U736 354 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 SPICQ8N5J4 248 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 C11orf42Q8N5U0 333 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 LINC01555Q8NAE3 123 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 OR1N2Q8NGR9 330 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 FRZBQ92765 325 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 STARD4Q96DR4 205 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 TRIB3Q96RU7 358 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 CDX2Q99626 313 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 APOL4Q9BPW4 351 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 ARL6Q9H0F7 186 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 Q9H3A6 140 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 RDH14Q9HBH5 336 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 EXOSC4Q9NPD3 245 aaKnown RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 MRPL16Q9NX20 251 aaKnown RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 TAS2R5Q9NYW4 299 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 MED11Q9P086 117 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF223Q9UK11 482 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 KIDINS220Q9ULH0 1771 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 ADGRB1O14514 1584 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 ERCC6L2Q5T890 1561 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 DOCK1Q14185 1865 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 MON2Q7Z3U7 1717 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 PARP4Q9UKK3 1724 aaKnown RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 IGKV3D-20A0A0C4DH25 116 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 A0A0G2JLM5 398 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 ARL5CA6NH57 179 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 OR4C46A6NHA9 309 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 BTNL10A8MVZ5 291 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 C1orf196B1AJZ1 125 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 PDCD5O14737 125 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 GYG2O15488 501 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 MT-ND4LP03901 98 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SMIM10L2AP0DMW4 78 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SMIM10L2BP0DMW5 78 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 FGF7P21781 194 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 CDK2P24941 298 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 TNFSF9P41273 254 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 DAP3P51398 398 aaKnown RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SLC35A1P78382 337 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 MRPS10P82664 201 aaKnown RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 TMEM267Q0VDI3 215 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 DHRS2Q13268 280 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF235Q14590 738 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 RGNQ15493 299 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 TAL2Q16559 108 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 ACOT6Q3I5F7 207 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 PDZD11Q5EBL8 140 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 OR10J3Q5JRS4 329 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 C9orf129Q5T035 196 aaKnown RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 HIST2H3PS2Q5TEC6 136 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 RPL22L1Q6P5R6 122 aaKnown RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 WDR59Q6PJI9 974 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 TEX43Q6ZNM6 134 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 MOB3BQ86TA1 216 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 FBXO16Q8IX29 292 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF615Q8N8J6 731 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 C5orf17Q8NAS9 161 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 OR10G4Q8NGN3 311 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 OR6K2Q8NGY2 324 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 OR5W2Q8NH69 310 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 DDIT4LQ96D03 193 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SLC35G5Q96KT7 338 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 OR4K3Q96R72 315 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 TP53RKQ96S44 253 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 HIST1H2BLQ99880 126 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 KRTAP4-4Q9BYR3 166 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 TMEM126AQ9H061 195 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 PRO1933Q9H354 126 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms