RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 ATP23Q9Y6H3 246 aa9.84□□□□□ -0.83
SHMT2-212ENST00000554467 J3QW42 95 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 PRRG2O14669 202 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 PTBP3O95758 552 aaKnown RBP9.83□□□□□ -0.84
SHMT2-212ENST00000554467 GZMBP10144 247 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 TDGF1P3P51864 188 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 KRTCAP3Q53RY4 240 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 ZNF324BQ6AW86 544 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-212ENST00000554467 EIF5AL1Q6IS14 154 aaKnown RBP9.83□□□□□ -0.84
SHMT2-212ENST00000554467 NDUFAF3Q9BU61 184 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 SNHG12Q9BXW3 62 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 PPP1R2P9O14990 202 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 SPRY3O43610 288 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 HAND1O96004 215 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 TRGC1P0CF51 173 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 TIMP3P35625 211 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 AESQ08117 197 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 WDR82Q6UXN9 313 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 TBC1D26Q86UD7 250 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 FRZBQ92765 325 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 CNTNAP3Q9BZ76 1288 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 MAGT1Q9H0U3 335 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 ERRFI1Q9UJM3 462 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-212ENST00000554467 RCL1Q9Y2P8 373 aaKnown RBP9.83□□□□□ -0.84
SHMT2-212ENST00000554467 ASH1LQ9NR48 2969 aaKnown RBP9.83□□□□□ -0.84
SHMT2-212ENST00000554467 USF3Q68DE3 2245 aa9.83□□□□□ -0.84
SHMT2-212ENST00000554467 IGHV3OR15-7A0A075B7D8 119 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 CRYAAP02489 173 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 CCKARP32238 428 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 IL13RA2Q14627 380 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 HAGHQ16775 308 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 FAM201AQ5SY85 155 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 PCSK4Q6UW60 755 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 OR5R1Q8NH85 324 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 PACRGQ96M98 296 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-212ENST00000554467 SLC35B3Q9H1N7 401 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 RFNGQ9Y644 331 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-212ENST00000554467 A8MXE2 369 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 CEACAM8P31997 349 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-212ENST00000554467 TIMM23BQ5SRD1 257 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 SLC25A31Q9H0C2 315 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 CXXC4Q9H2H0 198 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 SH2D1BO14796 132 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 HSPA12AO43301 675 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 ECI1P42126 302 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 CAMLGP49069 296 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 WFDC8Q8IUA0 241 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 OR52M1Q8NGK5 317 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 OR51H1Q8NH63 302 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 SIRT7Q9NRC8 400 aa9.82□□□□□ -0.84
SHMT2-212ENST00000554467 KIR2DS1A0A191URI9 304 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 MPPED1O15442 326 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 MBP02144 154 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 DANCRP0C864 163 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 EGR1P18146 543 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 KIR2DS4P43632 304 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 KIR2DS1Q14954 304 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 SLC35G3Q8N808 338 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 LRRC29Q8WV35 223 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 PLPPR2Q96GM1 343 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 DCTN5Q9BTE1 182 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 SFXN3Q9BWM7 321 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 SH3BGRL3Q9H299 93 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 TMED3Q9Y3Q3 217 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 ANKHD1Q8IWZ3 2542 aaKnown RBP9.81□□□□□ -0.84
SHMT2-212ENST00000554467 C3orf85A0A1B0GTC6 90 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 CYB5BO43169 146 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 NPSP0C0P6 89 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 KITLGP21583 273 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 PPP1CCP36873 323 aaKnown RBP9.81□□□□□ -0.84
SHMT2-212ENST00000554467 EIF5AP63241 154 aaKnown RBP9.81□□□□□ -0.84
SHMT2-212ENST00000554467 HLA-DRB3P79483 266 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 C4orf17Q53FE4 359 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 TMEM217Q8N7C4 229 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 MSI2Q96DH6 328 aaKnown RBP9.81□□□□□ -0.84
SHMT2-212ENST00000554467 WFDC1Q9HC57 220 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 KCNJ16Q9NPI9 418 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 UBE2J1Q9Y385 318 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-212ENST00000554467 MSRB2Q9Y3D2 182 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 SPTAN1Q13813 2472 aaKnown RBP9.81□□□□□ -0.84
SHMT2-212ENST00000554467 MBPP02686 304 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-212ENST00000554467 CCL20P78556 96 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 EDDM3AQ14507 147 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 LTC4SQ16873 150 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 ZNF497Q6ZNH5 498 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 LIAT1Q6ZQX7 453 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 ZCCHC24Q8N2G6 241 aaKnown RBP9.81□□□□□ -0.84
SHMT2-212ENST00000554467 RAB24Q969Q5 203 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 RAB39BQ96DA2 213 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 SSUH2Q9Y2M2 353 aa9.81□□□□□ -0.84
SHMT2-212ENST00000554467 RBM7Q9Y580 266 aaKnown RBP9.81□□□□□ -0.84
SHMT2-212ENST00000554467 TAAR5O14804 337 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 ZNF25P17030 456 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-212ENST00000554467 ZNF146Q15072 292 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 IZUMO4Q1ZYL8 232 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 LINC00596Q86U02 117 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 Q8IYB0 196 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 OR1L1Q8NH94 360 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 RFESDQ8TAC1 157 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms