RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 DUX4L5P0CJ88 424 aa10.37□□□□□ -0.75
CACNB3-217ENST00000550483 DUX4L6P0CJ89 424 aa10.37□□□□□ -0.75
CACNB3-217ENST00000550483 DUX4L7P0CJ90 424 aa10.37□□□□□ -0.75
CACNB3-217ENST00000550483 GPR6P46095 362 aaPredicted RBP10.37□□□□□ -0.75
CACNB3-217ENST00000550483 TAGLNQ01995 201 aaKnown RBP10.37□□□□□ -0.75
CACNB3-217ENST00000550483 EIF4EBP1Q13541 118 aaPredicted RBP10.37□□□□□ -0.75
CACNB3-217ENST00000550483 DUX4L9Q6RFH8 374 aaPredicted RBP10.37□□□□□ -0.75
CACNB3-217ENST00000550483 C5orf24Q7Z6I8 188 aa10.37□□□□□ -0.75
CACNB3-217ENST00000550483 ZNF546Q86UE3 836 aa10.37□□□□□ -0.75
CACNB3-217ENST00000550483 OR51H1Q8NH63 302 aa10.37□□□□□ -0.75
CACNB3-217ENST00000550483 GRPEL2Q8TAA5 225 aa10.37□□□□□ -0.75
CACNB3-217ENST00000550483 UBALD1Q8TB05 177 aa10.37□□□□□ -0.75
CACNB3-217ENST00000550483 RRNAD1Q96FB5 475 aaKnown RBP10.37□□□□□ -0.75
CACNB3-217ENST00000550483 OR10C1Q96KK4 312 aa10.37□□□□□ -0.75
CACNB3-217ENST00000550483 MFFQ9GZY8 342 aa10.37□□□□□ -0.75
CACNB3-217ENST00000550483 C19orf12Q9NSK7 152 aa10.37□□□□□ -0.75
CACNB3-217ENST00000550483 SDHAF2Q9NX18 166 aa10.37□□□□□ -0.75
CACNB3-217ENST00000550483 CTSZQ9UBR2 303 aa10.37□□□□□ -0.75
CACNB3-217ENST00000550483 DUX4Q9UBX2 424 aa10.37□□□□□ -0.75
CACNB3-217ENST00000550483 PAIP2BQ9ULR5 123 aaKnown RBP10.37□□□□□ -0.75
CACNB3-217ENST00000550483 PSG11Q9UQ72 335 aa10.37□□□□□ -0.75
CACNB3-217ENST00000550483 PRELID3BQ9Y3B1 194 aa10.37□□□□□ -0.75
CACNB3-217ENST00000550483 TRAV14DV4A0A0A6YYC5 116 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 IGHV3-43A0A0B4J1X8 118 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 A0A1W2PPR1 153 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 ARPC5O15511 151 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 IGHV3-43DP0DP04 118 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 MMP9P14780 707 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 COX6B1P14854 86 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 S100A11P31949 105 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 THBS3P49746 956 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 NMSQ5H8A3 153 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 TMEM200BQ69YZ2 307 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 LAMTOR1Q6IAA8 161 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 LYPD2Q6UXB3 125 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 SLC25A48Q6ZT89 311 aaKnown RBP10.36□□□□□ -0.75
CACNB3-217ENST00000550483 ACOT7LQ6ZUV0 252 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 ZNF767PQ75MW2 155 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 LYZL2Q7Z4W2 148 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 LINC00311Q8N616 119 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 ZNF439Q8NDP4 499 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 TCTEX1D2Q8WW35 142 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 WDR89Q96FK6 387 aaPredicted RBP10.36□□□□□ -0.75
CACNB3-217ENST00000550483 S1PR3Q99500 378 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 PARP12Q9H0J9 701 aaKnown RBP10.36□□□□□ -0.75
CACNB3-217ENST00000550483 IFI27L2Q9H2X8 130 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 PATZ1Q9HBE1 687 aaKnown RBP10.36□□□□□ -0.75
CACNB3-217ENST00000550483 COA4Q9NYJ1 87 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 TNFSF18Q9UNG2 199 aa10.36□□□□□ -0.75
CACNB3-217ENST00000550483 FBN3Q75N90 2809 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 FAM90A9PA6NNJ1 464 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 C17orf98A8MV24 154 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 F5H0A9 414 aaPredicted RBP10.35□□□□□ -0.75
CACNB3-217ENST00000550483 ST8SIA5O15466 376 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 ST8SIA3O43173 380 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 TNFSF12O43508 249 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 LY86O95711 162 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 PVALBP20472 110 aaPredicted RBP10.35□□□□□ -0.75
CACNB3-217ENST00000550483 IL3RAP26951 378 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 ZNF273Q14593 569 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 LTC4SQ16873 150 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 LGALSLQ3ZCW2 172 aaPredicted RBP10.35□□□□□ -0.75
CACNB3-217ENST00000550483 LRRC37A5PQ49AS3 106 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 Q5BKY6 102 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 WDR25Q64LD2 544 aaPredicted RBP10.35□□□□□ -0.75
CACNB3-217ENST00000550483 SP5Q6BEB4 398 aaPredicted RBP10.35□□□□□ -0.75
CACNB3-217ENST00000550483 ZNF841Q6ZN19 808 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 RNASE11Q8TAA1 199 aaKnown RBP10.35□□□□□ -0.75
CACNB3-217ENST00000550483 LHFPL5Q8TAF8 219 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 ZNF596Q8TC21 504 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 IGFBPL1Q8WX77 278 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 AIFM2Q9BRQ8 373 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 PLEKHA2Q9HB19 425 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 PRR13Q9NZ81 148 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 GSKIPQ9P0R6 139 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 MBD2Q9UBB5 411 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 ITGB1BP2Q9UKP3 347 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 SESN1Q9Y6P5 492 aa10.35□□□□□ -0.75
CACNB3-217ENST00000550483 ARFGEF3Q5TH69 2177 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 FAM90A26D6RGX4 464 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 E5RGE8 158 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 NDUFS8O00217 210 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 DEDDO75618 318 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 LIPFP07098 398 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 RRASP10301 218 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 NFYBP25208 207 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 DUTP33316 252 aaKnown RBP10.34□□□□□ -0.75
CACNB3-217ENST00000550483 PDLIM4P50479 330 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 AKR1C2P52895 323 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 GNB2P62879 340 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 RAB32Q13637 225 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 PRAMEF5Q5TYX0 476 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 DHRS7BQ6IAN0 325 aaPredicted RBP10.34□□□□□ -0.75
CACNB3-217ENST00000550483 SPAG16Q8N0X2 631 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 KCNRGQ8N5I3 272 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 OR4D5Q8NGN0 318 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 OR9G1Q8NH87 305 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 DCUN1D4Q92564 292 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 TMEM186Q96B77 213 aa10.34□□□□□ -0.75
CACNB3-217ENST00000550483 CCL19Q99731 98 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms