RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 CADM4Q8NFZ8 388 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 NABP1Q96AH0 204 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 RASL10BQ96S79 203 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 TMEM9BQ9NQ34 198 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 CCL28Q9NRJ3 127 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 TDRD6O60522 2096 aaKnown RBP7.68□□□□□ -1.18
SNHG1-209ENST00000538654 RALGAPA1Q6GYQ0 2036 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 LOC102723996A0A087X1L8 192 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 ZNF814B7Z6K7 855 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 DHHO43323 396 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 YPEL1O60688 119 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 ESDP10768 282 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 CCL5P13501 91 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 TESK1Q15569 626 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 PRAMEF5Q5TYX0 476 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 PRAMEF6Q5VXH4 476 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.68□□□□□ -1.18
SNHG1-209ENST00000538654 TMEM256Q8N2U0 113 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 YPEL2Q96QA6 119 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 LRRC61Q9BV99 259 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 STRADBQ9C0K7 418 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 METRNQ9UJH8 293 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 CHD3Q12873 2000 aaKnown RBP7.68□□□□□ -1.18
SNHG1-209ENST00000538654 OR6C6A6NF89 314 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 H0Y8G0 127 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 MLNRO43193 412 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 CD3EP07766 207 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 CRYGSP22914 178 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 CEACAM3P40198 252 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 RAB7AP51149 207 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 SELENOTP62341 195 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 RELBQ01201 579 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 FAM27BQ5VT28 67 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 RHBDD2Q6NTF9 364 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 RPP25LQ8N5L8 163 aaKnown RBP7.68□□□□□ -1.18
SNHG1-209ENST00000538654 OR2AE1Q8NHA4 323 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 OR4C12Q96R67 309 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 RBM24Q9BX46 236 aaKnown RBP7.68□□□□□ -1.18
SNHG1-209ENST00000538654 MSL2Q9HCI7 577 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 GPR27Q9NS67 375 aa7.68□□□□□ -1.18
SNHG1-209ENST00000538654 IGKV1D-13A0A0B4J2D9 117 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 A0A1B0GX78 115 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 TNFSF12O43508 249 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 PDE6DO43924 150 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 NAPSAO96009 420 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 IGKV1-13P0DP09 117 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 YPEL3P61236 119 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-209ENST00000538654 ATP6V1FQ16864 119 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 PDLIM3Q53GG5 364 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-209ENST00000538654 TPTE2P1Q5T6R2 138 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 C16orf47Q6ZP98 133 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-209ENST00000538654 YRDCQ86U90 279 aaKnown RBP7.67□□□□□ -1.18
SNHG1-209ENST00000538654 OR4B1Q8NGF8 309 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 WFIKKN1Q96NZ8 548 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 SIRPDQ9H106 197 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 TRAV9-1A0A075B6T8 112 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 C20orf202A1L168 122 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 FAM90A26D6RGX4 464 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 TMPRSS2O15393 492 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 TCF21O43680 179 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 IGHV4-34P06331 123 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 SELEP16581 610 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 MRPS21P82921 87 aaKnown RBP7.67□□□□□ -1.18
SNHG1-209ENST00000538654 SLC38A11Q08AI6 406 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 ARL16Q0P5N6 197 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 BATFQ16520 125 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 PLCXD3Q63HM9 321 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 C11orf42Q8N5U0 333 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 SLC35E1Q96K37 410 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 COL25A1Q9BXS0 654 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-209ENST00000538654 DNAJC4Q9NNZ3 241 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 AURKAIP1Q9NWT8 199 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-209ENST00000538654 CACNG5Q9UF02 275 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 DOCK8Q8NF50 2099 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 KIAA2026Q5HYC2 2103 aa7.67□□□□□ -1.18
SNHG1-209ENST00000538654 A0A0G2JRQ6 117 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 UBE2L5PA0A1B0GUS4 154 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 NPIPA2E9PIF3 369 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 NPIPA3F8WFD2 350 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 DLL1O00548 723 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 ITGB1BP1O14713 200 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 SYNGR4O95473 234 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 KRASP01116 189 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 SCTP09683 121 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 IAPPP10997 89 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 COX5AP20674 150 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 HNF1AP20823 631 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 CHRNB4P30926 498 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 TFF2Q03403 129 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 KIAA0895LQ68EN5 471 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 MRPL14Q6P1L8 145 aaKnown RBP7.66□□□□□ -1.18
SNHG1-209ENST00000538654 OR2M3Q8NG83 312 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 OR5AU1Q8NGC0 362 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 OR10G9Q8NGN4 311 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 OR10G7Q8NGN6 311 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 OR1F12Q8NHA8 337 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 TMEM186Q96B77 213 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 KLHDC7BQ96G42 594 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 GMPPAQ96IJ6 420 aaPredicted RBP7.66□□□□□ -1.18
SNHG1-209ENST00000538654 WIPI2Q9Y4P8 454 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms