RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 SPRNQ5BIV9 151 aa12.48□□□□□ -0.41
SSH3-210ENST00000532881 ACSM6Q6P461 480 aa12.48□□□□□ -0.41
SSH3-210ENST00000532881 KDF1Q8NAX2 398 aaPredicted RBP12.48□□□□□ -0.41
SSH3-210ENST00000532881 NECAP1Q8NC96 275 aa12.48□□□□□ -0.41
SSH3-210ENST00000532881 OR13A1Q8NGR1 328 aa12.48□□□□□ -0.41
SSH3-210ENST00000532881 LSM10Q969L4 123 aaKnown RBP12.48□□□□□ -0.41
SSH3-210ENST00000532881 WDR61Q9GZS3 305 aaKnown RBP12.48□□□□□ -0.41
SSH3-210ENST00000532881 LIN7CQ9NUP9 197 aaKnown RBP12.48□□□□□ -0.41
SSH3-210ENST00000532881 POLDIP2Q9Y2S7 368 aa12.48□□□□□ -0.41
SSH3-210ENST00000532881 M0R296 226 aa12.48□□□□□ -0.41
SSH3-210ENST00000532881 GALR2O43603 387 aaPredicted RBP12.48□□□□□ -0.41
SSH3-210ENST00000532881 BCL2P10415 239 aa12.48□□□□□ -0.41
SSH3-210ENST00000532881 MDH2P40926 338 aaKnown RBP12.48□□□□□ -0.41
SSH3-210ENST00000532881 TNFSF10P50591 281 aa12.48□□□□□ -0.41
SSH3-210ENST00000532881 PLA2G2CQ5R387 149 aa12.48□□□□□ -0.41
SSH3-210ENST00000532881 TCTEX1D2Q8WW35 142 aa12.48□□□□□ -0.41
SSH3-210ENST00000532881 GALMQ96C23 342 aa12.48□□□□□ -0.41
SSH3-210ENST00000532881 ZDHHC11Q9H8X9 412 aa12.48□□□□□ -0.41
SSH3-210ENST00000532881 AKAP13Q12802 2813 aa12.47□□□□□ -0.41
SSH3-210ENST00000532881 BTBD17A6NE02 478 aa12.47□□□□□ -0.41
SSH3-210ENST00000532881 IFNA17P01571 189 aa12.47□□□□□ -0.41
SSH3-210ENST00000532881 TNFRSF9Q07011 255 aa12.47□□□□□ -0.41
SSH3-210ENST00000532881 KHDC3LQ587J8 217 aa12.47□□□□□ -0.41
SSH3-210ENST00000532881 SSX9Q7RTT3 188 aa12.47□□□□□ -0.41
SSH3-210ENST00000532881 VKORC1L1Q8N0U8 176 aa12.47□□□□□ -0.41
SSH3-210ENST00000532881 C9orf106Q8NAJ2 232 aa12.47□□□□□ -0.41
SSH3-210ENST00000532881 CA5BP1Q8WTZ4 195 aa12.47□□□□□ -0.41
SSH3-210ENST00000532881 TAF15Q92804 592 aaKnown RBP eCLIP12.47□□□□□ -0.41
SSH3-210ENST00000532881 WIPI2Q9Y4P8 454 aa12.47□□□□□ -0.41
SSH3-210ENST00000532881 MAP1LC3B2A6NCE7 125 aa12.47□□□□□ -0.41
SSH3-210ENST00000532881 WDR25Q64LD2 544 aaPredicted RBP12.47□□□□□ -0.41
SSH3-210ENST00000532881 GMPPAQ96IJ6 420 aaPredicted RBP12.47□□□□□ -0.41
SSH3-210ENST00000532881 MAP1LC3BQ9GZQ8 125 aa12.47□□□□□ -0.41
SSH3-210ENST00000532881 TRAV20A0A0B4J274 112 aa12.46□□□□□ -0.41
SSH3-210ENST00000532881 NPIPB11E5RHQ5 1161 aa12.46□□□□□ -0.41
SSH3-210ENST00000532881 HIST1H2BKO60814 126 aa12.46□□□□□ -0.41
SSH3-210ENST00000532881 HIST1H2BJP06899 126 aa12.46□□□□□ -0.41
SSH3-210ENST00000532881 HIST1H2BOP23527 126 aa12.46□□□□□ -0.41
SSH3-210ENST00000532881 HIST1H2BBP33778 126 aa12.46□□□□□ -0.41
SSH3-210ENST00000532881 HIST1H2BDP58876 126 aa12.46□□□□□ -0.41
SSH3-210ENST00000532881 HIST1H2BCP62807 126 aa12.46□□□□□ -0.41
SSH3-210ENST00000532881 COL10A1Q03692 680 aa12.46□□□□□ -0.41
SSH3-210ENST00000532881 HIST2H2BEQ16778 126 aa12.46□□□□□ -0.41
SSH3-210ENST00000532881 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.46□□□□□ -0.41
SSH3-210ENST00000532881 EDARADDQ8WWZ3 215 aa12.46□□□□□ -0.41
SSH3-210ENST00000532881 HIST1H2BHQ93079 126 aa12.46□□□□□ -0.41
SSH3-210ENST00000532881 MALSU1Q96EH3 234 aa12.46□□□□□ -0.41
SSH3-210ENST00000532881 HIST1H2BNQ99877 126 aa12.46□□□□□ -0.41
SSH3-210ENST00000532881 HIST1H2BMQ99879 126 aa12.46□□□□□ -0.41
SSH3-210ENST00000532881 PSG11Q9UQ72 335 aa12.46□□□□□ -0.41
SSH3-210ENST00000532881 BSNQ9UPA5 3926 aa12.46□□□□□ -0.41
SSH3-210ENST00000532881 IGHV3OR15-7A0A075B7D8 119 aa12.46□□□□□ -0.42
SSH3-210ENST00000532881 HBE1P02100 147 aa12.46□□□□□ -0.42
SSH3-210ENST00000532881 EIF2S3P41091 472 aaKnown RBP12.46□□□□□ -0.42
SSH3-210ENST00000532881 KIR2DL2P43627 348 aaPredicted RBP12.46□□□□□ -0.42
SSH3-210ENST00000532881 MRPL49Q13405 166 aaKnown RBP12.46□□□□□ -0.42
SSH3-210ENST00000532881 RTP5Q14D33 572 aa12.46□□□□□ -0.42
SSH3-210ENST00000532881 Q3ZCU0 254 aa12.46□□□□□ -0.42
SSH3-210ENST00000532881 GCSAMLQ5JQS6 135 aa12.46□□□□□ -0.42
SSH3-210ENST00000532881 WDR82Q6UXN9 313 aa12.46□□□□□ -0.42
SSH3-210ENST00000532881 FAM214BQ7L5A3 538 aa12.46□□□□□ -0.42
SSH3-210ENST00000532881 LRP11Q86VZ4 500 aa12.46□□□□□ -0.42
SSH3-210ENST00000532881 ZNF645Q8N7E2 425 aa12.46□□□□□ -0.42
SSH3-210ENST00000532881 OR5T1Q8NG75 326 aa12.46□□□□□ -0.42
SSH3-210ENST00000532881 OR8G5Q8NG78 346 aa12.46□□□□□ -0.42
SSH3-210ENST00000532881 LHX4Q969G2 390 aa12.46□□□□□ -0.42
SSH3-210ENST00000532881 RPUSD4Q96CM3 377 aaKnown RBP12.46□□□□□ -0.42
SSH3-210ENST00000532881 AURKAIP1Q9NWT8 199 aaPredicted RBP12.46□□□□□ -0.42
SSH3-210ENST00000532881 KCNIP1Q9NZI2 227 aa12.46□□□□□ -0.42
SSH3-210ENST00000532881 IQCF6A8MYZ5 107 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 TIMM8AO60220 97 aaPredicted RBP12.45□□□□□ -0.42
SSH3-210ENST00000532881 SLC25A6P12236 298 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 RAC2P15153 192 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 EGR1P18146 543 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 MSMPQ1L6U9 139 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 WDR31Q8NA23 367 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 OPN3Q9H1Y3 402 aaPredicted RBP12.45□□□□□ -0.42
SSH3-210ENST00000532881 SMDT1Q9H4I9 107 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 RELNP78509 3460 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 ZNF737O75373 536 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 SOD3P08294 240 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 CECR9P0C854 216 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 SMIM6P0DI80 62 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 HBG1P69891 147 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 HBG2P69892 147 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 TGFBR3Q03167 851 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 ABHD5Q8WTS1 349 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 FRZBQ92765 325 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 LEAP2Q969E1 77 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 GPR61Q9BZJ8 451 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 UNKLQ9H9P5 680 aaKnown RBP12.45□□□□□ -0.42
SSH3-210ENST00000532881 SLC39A9Q9NUM3 307 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 CLCF1Q9UBD9 225 aa12.45□□□□□ -0.42
SSH3-210ENST00000532881 SPAARA0A1B0GVQ0 90 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 TMEM30CPA0ZSE6 113 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 SOX15O60248 233 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 S100A8P05109 93 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 MAS1LP35410 378 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 CD81P60033 236 aa12.44□□□□□ -0.42
SSH3-210ENST00000532881 FAM201AQ5SY85 155 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms