RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 ST8SIA5O15466 376 aa14.38□□□□□ -0.11
PCDHA6-202ENST00000527624 PITX3O75364 302 aa14.38□□□□□ -0.11
PCDHA6-202ENST00000527624 IGKV1-5P01602 117 aa14.38□□□□□ -0.11
PCDHA6-202ENST00000527624 PRH1P02810 166 aa14.38□□□□□ -0.11
PCDHA6-202ENST00000527624 WNT2P09544 360 aa14.38□□□□□ -0.11
PCDHA6-202ENST00000527624 C1QTNF9P0C862 333 aa14.38□□□□□ -0.11
PCDHA6-202ENST00000527624 CLINT1Q14677 625 aa14.38□□□□□ -0.11
PCDHA6-202ENST00000527624 SLC25A31Q9H0C2 315 aa14.38□□□□□ -0.11
PCDHA6-202ENST00000527624 PSG11Q9UQ72 335 aa14.38□□□□□ -0.11
PCDHA6-202ENST00000527624 NBASA2RRP1 2371 aa14.38□□□□□ -0.11
PCDHA6-202ENST00000527624 RAMP3O60896 148 aa14.38□□□□□ -0.11
PCDHA6-202ENST00000527624 TMEM50AO95807 157 aa14.38□□□□□ -0.11
PCDHA6-202ENST00000527624 OMGP23515 440 aa14.38□□□□□ -0.11
PCDHA6-202ENST00000527624 RPL30P62888 115 aaKnown RBP14.38□□□□□ -0.11
PCDHA6-202ENST00000527624 VAMP2P63027 116 aa14.38□□□□□ -0.11
PCDHA6-202ENST00000527624 CACNG5Q9UF02 275 aa14.38□□□□□ -0.11
PCDHA6-202ENST00000527624 KPTNQ9Y664 436 aa14.38□□□□□ -0.11
PCDHA6-202ENST00000527624 FAM90A27PA6NNH2 459 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 IGHV3-7P01780 117 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 MMP9P14780 707 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 PLA2G5P39877 138 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 PPT1P50897 306 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 PEA15Q15121 130 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 GUK1Q16774 197 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 TRAT1Q6PIZ9 186 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 FAM222BQ8WU58 562 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 NEUROG1Q92886 237 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 TOLLIPQ9H0E2 274 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 GNG12Q9UBI6 72 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 PKDREJQ9NTG1 2253 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 A0A1B0GU03 582 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 RNF212BA8MTL3 300 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 C17orf100A8MU93 164 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 WRBO00258 174 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 CHST1O43916 411 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 GYPAP02724 150 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 CA7P43166 264 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 LINC00205P59089 165 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 STUMQ69YW2 141 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 TMEM182Q6ZP80 229 aaPredicted RBP14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 CCL13Q99616 98 aa14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 SEBOXQ9HB31 216 aaPredicted RBP14.37□□□□□ -0.11
PCDHA6-202ENST00000527624 IRF2P14316 349 aa14.36□□□□□ -0.11
PCDHA6-202ENST00000527624 GZMHP20718 246 aa14.36□□□□□ -0.11
PCDHA6-202ENST00000527624 ATP6V0CP27449 155 aa14.36□□□□□ -0.11
PCDHA6-202ENST00000527624 HTD2P86397 168 aa14.36□□□□□ -0.11
PCDHA6-202ENST00000527624 ODF3L1Q8IXM7 274 aa14.36□□□□□ -0.11
PCDHA6-202ENST00000527624 Q8TCH9 128 aa14.36□□□□□ -0.11
PCDHA6-202ENST00000527624 RNF115Q9Y4L5 304 aa14.36□□□□□ -0.11
PCDHA6-202ENST00000527624 CCL21O00585 134 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 TLE1Q04724 770 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 BAXQ07812 192 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 ZNF816Q0VGE8 651 aaPredicted RBP14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 EIF4EBP1Q13541 118 aaPredicted RBP14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 Q3ZCU0 254 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 SSX8Q7RTT4 187 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 ZNF561Q8N587 486 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 FAM216BQ8N7L0 139 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 ZBTB34Q8NCN2 500 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 OR5C1Q8NGR4 320 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 TCTEX1D2Q8WW35 142 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 LSM10Q969L4 123 aaKnown RBP14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 EIF5A2Q9GZV4 153 aaKnown RBP14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 NGBQ9NPG2 151 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 MLXQ9UH92 298 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 PRELID3BQ9Y3B1 194 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 PIGBOS1A0A0B4J2F0 54 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 ADH4P08319 380 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 OR2G3Q8NGZ4 309 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 FAM213BQ8TBF2 198 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 SDSLQ96GA7 329 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 GAFA1Q96PS6 74 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 AGMATQ9BSE5 352 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 DSCAMO60469 2012 aa14.35□□□□□ -0.11
PCDHA6-202ENST00000527624 C17orf98A8MV24 154 aa14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 SHISA9B4DS77 424 aa14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 H3BP45 60 aa14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 CST7O76096 145 aa14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 GRNP28799 593 aaKnown RBP14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 DMRTC2Q8IXT2 367 aaPredicted RBP14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 FGFRL1Q8N441 504 aa14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 C14orf79Q96F83 325 aa14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 RFNGQ9Y644 331 aa14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 MED19A0JLT2 244 aaPredicted RBP14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 KIAA1324LA8MWY0 1029 aaPredicted RBP14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 UMAD1C9J7I0 102 aa14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 SLC25A6P12236 298 aa14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 TNFRSF1AP19438 455 aa14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 DYNLT3P51808 116 aa14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 PAX9P55771 341 aa14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 UTF1Q5T230 341 aa14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 TMEM217Q8N7C4 229 aa14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 ST6GALNAC3Q8NDV1 305 aa14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 LINC01560Q8TB33 94 aa14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 CALYQ9NYX4 217 aa14.34□□□□□ -0.11
PCDHA6-202ENST00000527624 USF3Q68DE3 2245 aa14.33□□□□□ -0.11
PCDHA6-202ENST00000527624 E7EQL1 145 aa14.33□□□□□ -0.12
PCDHA6-202ENST00000527624 CLDN1O95832 211 aa14.33□□□□□ -0.12
PCDHA6-202ENST00000527624 KRASP01116 189 aa14.33□□□□□ -0.12
PCDHA6-202ENST00000527624 G6PCP35575 357 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms