RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 NRBF2Q96F24 287 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 MRPL48Q96GC5 212 aaKnown RBP6.89□□□□□ -1.31
COL17A1-207ENST00000488320 NSL1Q96IY1 281 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 C4orf36Q96KX1 117 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 FAM107BQ9H098 131 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 RIBC2Q9H4K1 309 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 TAS2R4Q9NYW5 299 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 LRRC42Q9Y546 428 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 PKD1P98161 4303 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 H3BNX3 289 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 MPPED1O15442 326 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 CA11O75493 328 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 GPX5O75715 221 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 SPDEFO95238 335 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 CTRB1P17538 263 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 CBLN1P23435 193 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 EXOSC2Q13868 293 aaKnown RBP6.88□□□□□ -1.31
COL17A1-207ENST00000488320 GPR176Q14439 515 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 LY6G6FQ5SQ64 297 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 DDI2Q5TDH0 399 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 DMKNQ6E0U4 476 aaPredicted RBP6.88□□□□□ -1.31
COL17A1-207ENST00000488320 CTRB2Q6GPI1 263 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 RBPMS2Q6ZRY4 209 aaKnown RBP6.88□□□□□ -1.31
COL17A1-207ENST00000488320 SLC38A6Q8IZM9 456 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 TMEM61Q8N0U2 210 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 GVQW1Q8N7I0 195 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 OR5AN1Q8NGI8 311 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 CACNG8Q8WXS5 425 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 CCDC124Q96CT7 223 aaKnown RBP6.88□□□□□ -1.31
COL17A1-207ENST00000488320 ABHD14BQ96IU4 210 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 PDCD1LG2Q9BQ51 273 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 IFI27L2Q9H2X8 130 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 ABRACLQ9P1F3 81 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 FBXL7Q9UJT9 491 aa6.88□□□□□ -1.31
COL17A1-207ENST00000488320 ZNF320A2RRD8 509 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 TMEM212A6NML5 194 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 FAM90A23PA8MXZ1 464 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 PPP5D1E7EU14 171 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 GGCTO75223 188 aaKnown RBP6.87□□□□□ -1.31
COL17A1-207ENST00000488320 OR2C1O95371 312 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 BAG2O95816 211 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 HLA-AP01891 365 aaKnown RBP6.87□□□□□ -1.31
COL17A1-207ENST00000488320 APOA2P02652 100 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 CD2P06729 351 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 HOXB6P17509 224 aaKnown RBP6.87□□□□□ -1.31
COL17A1-207ENST00000488320 RPL35AP18077 110 aaKnown RBP6.87□□□□□ -1.31
COL17A1-207ENST00000488320 MAP2K4P45985 399 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 PPP3R1P63098 170 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 RHOGP84095 191 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 PJVKQ0ZLH3 352 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 SLC25A30Q5SVS4 291 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 ZNF554Q86TJ5 538 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 GAPTQ8N292 157 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 OR2C3Q8N628 320 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 DRAXINQ8NBI3 349 aaPredicted RBP6.87□□□□□ -1.31
COL17A1-207ENST00000488320 OR1L6Q8NGR2 347 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 FBLIM1Q8WUP2 373 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 ASB9Q96DX5 294 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 MYCBPQ99417 103 aaPredicted RBP6.87□□□□□ -1.31
COL17A1-207ENST00000488320 AKIP1Q9NQ31 210 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 UBQLN2Q9UHD9 624 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 APLNQ9ULZ1 77 aa6.87□□□□□ -1.31
COL17A1-207ENST00000488320 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.86□□□□□ -1.31
COL17A1-207ENST00000488320 KIR2DL5BA0A0G2JN68 375 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 KIR2DL5BA0A0G2JPC4 375 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 FAM223BA6NKX1 122 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 AQP12BA6NM10 295 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 M0R2N4 97 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 RBMXL2O75526 392 aaKnown RBP6.86□□□□□ -1.31
COL17A1-207ENST00000488320 PRH1P02810 166 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 IGKV1-16P04430 117 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 OR9G9P0C7N8 305 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 FUT3P21217 361 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 BDKRB2P30411 391 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 MED22Q15528 200 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 TMEM177Q53S58 311 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 ZNF529Q6P280 563 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 LHFPL3Q86UP9 236 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 SPATA24Q86W54 205 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 ZNF575Q86XF7 245 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 FAM223AQ8IWN6 122 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 AQP12AQ8IXF9 295 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 KIR2DL5AQ8N109 375 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 ACBD7Q8N6N7 88 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 UXS1Q8NBZ7 420 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 ADAD2Q8NCV1 583 aaKnown RBP6.86□□□□□ -1.31
COL17A1-207ENST00000488320 OR8J1Q8NGP2 316 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 KIR2DL5BQ8NHK3 375 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 KCNG3Q8TAE7 436 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 MRPL30Q8TCC3 161 aaKnown RBP6.86□□□□□ -1.31
COL17A1-207ENST00000488320 RARRES2Q99969 163 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 SELENOIQ9C0D9 397 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 TMEM138Q9NPI0 162 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 ARGLU1Q9NWB6 273 aaPredicted RBP6.86□□□□□ -1.31
COL17A1-207ENST00000488320 MLXQ9UH92 298 aa6.86□□□□□ -1.31
COL17A1-207ENST00000488320 ZNF230Q9UIE0 474 aaPredicted RBP6.86□□□□□ -1.31
COL17A1-207ENST00000488320 EXOSC1Q9Y3B2 195 aaKnown RBP6.86□□□□□ -1.31
COL17A1-207ENST00000488320 LGALS9O00182 355 aa6.85□□□□□ -1.31
COL17A1-207ENST00000488320 FKBP6O75344 327 aa6.85□□□□□ -1.31
COL17A1-207ENST00000488320 SC5DO75845 299 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms