RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 DUX4L6P0CJ89 424 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 DUX4L7P0CJ90 424 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 PPIAL4GP0DN37 164 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 SELLP14151 372 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 NDUFB7P17568 137 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 AADACP22760 399 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 NFYAP23511 347 aaPredicted RBP4.48□□□□□ -1.69
VPS41-211ENST00000466017 DNASE1P24855 282 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 S100GP29377 79 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 ZNF137PP52743 207 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 ATP5J2P56134 94 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 EDDM3BP56851 147 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 HERV-K104P61576 105 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 RRAS2P62070 204 aaPredicted RBP4.48□□□□□ -1.69
VPS41-211ENST00000466017 GNB2P62879 340 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 PAX2Q02962 417 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 SRSF4Q08170 494 aaKnown RBP4.48□□□□□ -1.69
VPS41-211ENST00000466017 EIF4EBP1Q13541 118 aaPredicted RBP4.48□□□□□ -1.69
VPS41-211ENST00000466017 EDDM3AQ14507 147 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 DEFB113Q30KQ7 82 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 FAM71F2Q6NXP2 309 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 DUX4L9Q6RFH8 374 aaPredicted RBP4.48□□□□□ -1.69
VPS41-211ENST00000466017 CLEC2AQ6UVW9 174 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 LYG2Q86SG7 212 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 GLCCI1Q86VQ1 547 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 KIR3DL3Q8N743 410 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 TPRX1Q8N7U7 411 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 CCDC71LQ8N9Z2 235 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 ZNF439Q8NDP4 499 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 MITD1Q8WV92 249 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 IL22RA2Q969J5 263 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 TMEM230Q96A57 120 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 ZNF714Q96N38 554 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 AGMATQ9BSE5 352 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 PIMREGQ9BSJ6 248 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 SUCNR1Q9BXA5 334 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 OR51J1Q9H342 316 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 OR2S2Q9NQN1 319 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 C19orf12Q9NSK7 152 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 RDH8Q9NYR8 311 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 PIPOXQ9P0Z9 390 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 DUX4Q9UBX2 424 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 ZNF69Q9UC07 566 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 FLVCR2Q9UPI3 526 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 C14orf166Q9Y224 244 aaKnown RBP4.48□□□□□ -1.69
VPS41-211ENST00000466017 KPTNQ9Y664 436 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 RELNP78509 3460 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 ADGRG4Q8IZF6 3080 aa4.48□□□□□ -1.69
VPS41-211ENST00000466017 KALRNO60229 2985 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 ZFYVE26Q68DK2 2539 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 LOC105371242A0A075B767 164 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 TRAV39A0A0B4J263 110 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 TEX13DA0A0J9YY54 714 aaPredicted RBP4.47□□□□□ -1.69
VPS41-211ENST00000466017 DUXBA0A1W2PPF3 345 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 BET1O15155 118 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 MPPED1O15442 326 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 HSPA12AO43301 675 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 CREBL2O60519 120 aaPredicted RBP4.47□□□□□ -1.69
VPS41-211ENST00000466017 PGLYRP1O75594 196 aaPredicted RBP4.47□□□□□ -1.69
VPS41-211ENST00000466017 SNAPC5O75971 98 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 LY6HO94772 140 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 OR2A4O95047 310 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 IGLV2-14P01704 120 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 TFF1P04155 84 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 RLN1P04808 185 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 SULT1A3P0DMM9 295 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 SULT1A4P0DMN0 295 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 IGHV1-8P0DP01 117 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 ANXA3P12429 323 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 PGAM2P15259 253 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 RPA2P15927 270 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 ANXA7P20073 488 aaKnown RBP4.47□□□□□ -1.69
VPS41-211ENST00000466017 PRTN3P24158 256 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 RBMXP38159 391 aaKnown RBP4.47□□□□□ -1.69
VPS41-211ENST00000466017 ARHGDIBP52566 201 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 PIGPP57054 158 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 SUPT4H1P63272 117 aaKnown RBP4.47□□□□□ -1.69
VPS41-211ENST00000466017 SRPXP78539 464 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 LOXL1Q08397 574 aaPredicted RBP4.47□□□□□ -1.69
VPS41-211ENST00000466017 DHRS2Q13268 280 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 ZNF273Q14593 569 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 ESCO2Q56NI9 601 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 AVPI1Q5T686 147 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 SLC25A48Q6ZT89 311 aaKnown RBP4.47□□□□□ -1.69
VPS41-211ENST00000466017 C5orf24Q7Z6I8 188 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 SGPP2Q8IWX5 399 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 CMTM1Q8IZ96 169 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 C12orf45Q8N5I9 185 aaPredicted RBP4.47□□□□□ -1.69
VPS41-211ENST00000466017 ZNF525Q8N782 197 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 ZNF645Q8N7E2 425 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 OR52L2PQ8NGH6 319 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 OR9G1Q8NH87 305 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 CLDND2Q8NHS1 167 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 COQ8AQ8NI60 647 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 RFESDQ8TAC1 157 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 RTN4IP1Q8WWV3 396 aaPredicted RBP4.47□□□□□ -1.69
VPS41-211ENST00000466017 TMEM186Q96B77 213 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 OR2A7Q96R45 310 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 NEURL2Q9BR09 285 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 BPESC1Q9GZL8 116 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms