RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 NOL3O60936 208 aaKnown RBP12.24□□□□□ -0.45
RAB11FIP3-208ENST00000464263 F2RL1P55085 397 aa12.24□□□□□ -0.45
RAB11FIP3-208ENST00000464263 LINC00205P59089 165 aa12.24□□□□□ -0.45
RAB11FIP3-208ENST00000464263 Q8N9W7 124 aa12.24□□□□□ -0.45
RAB11FIP3-208ENST00000464263 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.24□□□□□ -0.45
RAB11FIP3-208ENST00000464263 OR5AN1Q8NGI8 311 aa12.24□□□□□ -0.45
RAB11FIP3-208ENST00000464263 SNAPC3Q92966 411 aa12.24□□□□□ -0.45
RAB11FIP3-208ENST00000464263 RITA1Q96K30 269 aa12.24□□□□□ -0.45
RAB11FIP3-208ENST00000464263 WNT10AQ9GZT5 417 aa12.24□□□□□ -0.45
RAB11FIP3-208ENST00000464263 RBM38Q9H0Z9 239 aaKnown RBP12.24□□□□□ -0.45
RAB11FIP3-208ENST00000464263 OR2D2Q9H210 308 aa12.24□□□□□ -0.45
RAB11FIP3-208ENST00000464263 SDHAF2Q9NX18 166 aa12.24□□□□□ -0.45
RAB11FIP3-208ENST00000464263 CCDC59Q9P031 241 aaKnown RBP12.24□□□□□ -0.45
RAB11FIP3-208ENST00000464263 MRPS7Q9Y2R9 242 aaKnown RBP12.24□□□□□ -0.45
RAB11FIP3-208ENST00000464263 OR2W1Q9Y3N9 320 aa12.24□□□□□ -0.45
RAB11FIP3-208ENST00000464263 FAM25AB3EWG3 89 aa12.23□□□□□ -0.45
RAB11FIP3-208ENST00000464263 FAM25CB3EWG5 89 aa12.23□□□□□ -0.45
RAB11FIP3-208ENST00000464263 FAM25GB3EWG6 89 aa12.23□□□□□ -0.45
RAB11FIP3-208ENST00000464263 H0YJW9 148 aa12.23□□□□□ -0.45
RAB11FIP3-208ENST00000464263 TUSC2O75896 110 aa12.23□□□□□ -0.45
RAB11FIP3-208ENST00000464263 FCER2P06734 321 aa12.23□□□□□ -0.45
RAB11FIP3-208ENST00000464263 NAT1P18440 290 aa12.23□□□□□ -0.45
RAB11FIP3-208ENST00000464263 NFYAP23511 347 aaPredicted RBP12.23□□□□□ -0.45
RAB11FIP3-208ENST00000464263 MC5RP33032 325 aa12.23□□□□□ -0.45
RAB11FIP3-208ENST00000464263 GLDNQ6ZMI3 551 aaPredicted RBP12.23□□□□□ -0.45
RAB11FIP3-208ENST00000464263 DRAXINQ8NBI3 349 aaPredicted RBP12.23□□□□□ -0.45
RAB11FIP3-208ENST00000464263 OR5AP2Q8NGF4 316 aa12.23□□□□□ -0.45
RAB11FIP3-208ENST00000464263 OR8H1Q8NGG4 311 aa12.23□□□□□ -0.45
RAB11FIP3-208ENST00000464263 GPX8Q8TED1 209 aa12.23□□□□□ -0.45
RAB11FIP3-208ENST00000464263 C5orf30Q96GV9 206 aa12.23□□□□□ -0.45
RAB11FIP3-208ENST00000464263 SLIRPQ9GZT3 109 aaKnown RBP12.23□□□□□ -0.45
RAB11FIP3-208ENST00000464263 OR5H14A6NHG9 310 aa12.22□□□□□ -0.45
RAB11FIP3-208ENST00000464263 NCBP2LA6PVI3 153 aaKnown RBP12.22□□□□□ -0.45
RAB11FIP3-208ENST00000464263 TPPPO94811 219 aa12.22□□□□□ -0.45
RAB11FIP3-208ENST00000464263 ARPC4P59998 168 aa12.22□□□□□ -0.45
RAB11FIP3-208ENST00000464263 TMEM95Q3KNT9 176 aa12.22□□□□□ -0.45
RAB11FIP3-208ENST00000464263 FAM131AQ6UXB0 335 aa12.22□□□□□ -0.45
RAB11FIP3-208ENST00000464263 SNX29P2Q8IUI4 249 aa12.22□□□□□ -0.45
RAB11FIP3-208ENST00000464263 LYSMD2Q8IV50 215 aa12.22□□□□□ -0.45
RAB11FIP3-208ENST00000464263 KLHDC1Q8N7A1 406 aa12.22□□□□□ -0.45
RAB11FIP3-208ENST00000464263 ZNF383Q8NA42 475 aa12.22□□□□□ -0.45
RAB11FIP3-208ENST00000464263 WIPF2Q8TF74 440 aaPredicted RBP12.22□□□□□ -0.45
RAB11FIP3-208ENST00000464263 SCPEP1Q9HB40 452 aa12.22□□□□□ -0.45
RAB11FIP3-208ENST00000464263 IFT46Q9NQC8 304 aa12.22□□□□□ -0.45
RAB11FIP3-208ENST00000464263 EXTL2Q9UBQ6 330 aa12.22□□□□□ -0.45
RAB11FIP3-208ENST00000464263 ADAM30Q9UKF2 790 aa12.22□□□□□ -0.45
RAB11FIP3-208ENST00000464263 RBM7Q9Y580 266 aaKnown RBP12.22□□□□□ -0.45
RAB11FIP3-208ENST00000464263 IGKV1D-13A0A0B4J2D9 117 aa12.21□□□□□ -0.45
RAB11FIP3-208ENST00000464263 J3QRK9 145 aa12.21□□□□□ -0.45
RAB11FIP3-208ENST00000464263 M0R1X1 148 aa12.21□□□□□ -0.45
RAB11FIP3-208ENST00000464263 SULT1C2O00338 296 aa12.21□□□□□ -0.45
RAB11FIP3-208ENST00000464263 RGS5O15539 181 aa12.21□□□□□ -0.45
RAB11FIP3-208ENST00000464263 OR5H8P0DN80 308 aa12.21□□□□□ -0.45
RAB11FIP3-208ENST00000464263 IGKV1-13P0DP09 117 aa12.21□□□□□ -0.45
RAB11FIP3-208ENST00000464263 VDAC2P45880 294 aaPredicted RBP12.21□□□□□ -0.45
RAB11FIP3-208ENST00000464263 LUMP51884 338 aaPredicted RBP12.21□□□□□ -0.45
RAB11FIP3-208ENST00000464263 ACTBP60709 375 aa12.21□□□□□ -0.45
RAB11FIP3-208ENST00000464263 CDK10Q15131 360 aa12.21□□□□□ -0.45
RAB11FIP3-208ENST00000464263 LAX1Q8IWV1 398 aa12.21□□□□□ -0.45
RAB11FIP3-208ENST00000464263 FAM71E2Q8N5Q1 922 aa12.21□□□□□ -0.45
RAB11FIP3-208ENST00000464263 ABHD1Q96SE0 405 aa12.21□□□□□ -0.45
RAB11FIP3-208ENST00000464263 NXF2Q9GZY0 626 aaKnown RBP12.21□□□□□ -0.45
RAB11FIP3-208ENST00000464263 LIN7CQ9NUP9 197 aaKnown RBP12.21□□□□□ -0.45
RAB11FIP3-208ENST00000464263 NECAP2Q9NVZ3 263 aa12.21□□□□□ -0.45
RAB11FIP3-208ENST00000464263 CCDC160A6NGH7 325 aa12.2□□□□□ -0.46
RAB11FIP3-208ENST00000464263 ZNF701M0R085 212 aaPredicted RBP12.2□□□□□ -0.46
RAB11FIP3-208ENST00000464263 IGLV2-14P01704 120 aa12.2□□□□□ -0.46
RAB11FIP3-208ENST00000464263 IGHG2P01859 326 aa12.2□□□□□ -0.46
RAB11FIP3-208ENST00000464263 VSIG10L2P0DP72 767 aa12.2□□□□□ -0.46
RAB11FIP3-208ENST00000464263 CNTFRP26992 372 aa12.2□□□□□ -0.46
RAB11FIP3-208ENST00000464263 FCGR2CP31995 323 aa12.2□□□□□ -0.46
RAB11FIP3-208ENST00000464263 ARSJQ5FYB0 599 aaPredicted RBP12.2□□□□□ -0.46
RAB11FIP3-208ENST00000464263 C9orf152Q5JTZ5 239 aa12.2□□□□□ -0.46
RAB11FIP3-208ENST00000464263 NPBQ8NG41 125 aa12.2□□□□□ -0.46
RAB11FIP3-208ENST00000464263 GIMAP1Q8WWP7 306 aa12.2□□□□□ -0.46
RAB11FIP3-208ENST00000464263 WASHC3Q9Y3C0 194 aa12.2□□□□□ -0.46
RAB11FIP3-208ENST00000464263 LINC01548A6NM66 108 aa12.19□□□□□ -0.46
RAB11FIP3-208ENST00000464263 H7C2Y5 167 aa12.19□□□□□ -0.46
RAB11FIP3-208ENST00000464263 AADACP22760 399 aa12.19□□□□□ -0.46
RAB11FIP3-208ENST00000464263 RFX2P48378 723 aa12.19□□□□□ -0.46
RAB11FIP3-208ENST00000464263 MMDQ15546 238 aa12.19□□□□□ -0.46
RAB11FIP3-208ENST00000464263 ZNF660Q6AZW8 331 aaPredicted RBP12.19□□□□□ -0.46
RAB11FIP3-208ENST00000464263 DHRS11Q6UWP2 260 aa12.19□□□□□ -0.46
RAB11FIP3-208ENST00000464263 OVCH2Q7RTZ1 564 aa12.19□□□□□ -0.46
RAB11FIP3-208ENST00000464263 ZNF645Q8N7E2 425 aa12.19□□□□□ -0.46
RAB11FIP3-208ENST00000464263 RNF5Q99942 180 aa12.19□□□□□ -0.46
RAB11FIP3-208ENST00000464263 RASL11BQ9BPW5 248 aa12.19□□□□□ -0.46
RAB11FIP3-208ENST00000464263 RSL24D1Q9UHA3 163 aaKnown RBP12.19□□□□□ -0.46
RAB11FIP3-208ENST00000464263 NBR2O15453 112 aa12.18□□□□□ -0.46
RAB11FIP3-208ENST00000464263 RBBP9O75884 186 aa12.18□□□□□ -0.46
RAB11FIP3-208ENST00000464263 SLC22A5O76082 557 aa12.18□□□□□ -0.46
RAB11FIP3-208ENST00000464263 NDUFA3O95167 84 aa12.18□□□□□ -0.46
RAB11FIP3-208ENST00000464263 PPYP01298 95 aa12.18□□□□□ -0.46
RAB11FIP3-208ENST00000464263 PMP2P02689 132 aa12.18□□□□□ -0.46
RAB11FIP3-208ENST00000464263 IGKV1-16P04430 117 aa12.18□□□□□ -0.46
RAB11FIP3-208ENST00000464263 DUTP33316 252 aaKnown RBP12.18□□□□□ -0.46
RAB11FIP3-208ENST00000464263 THBS3P49746 956 aa12.18□□□□□ -0.46
RAB11FIP3-208ENST00000464263 EIF4EBP1Q13541 118 aaPredicted RBP12.18□□□□□ -0.46
RAB11FIP3-208ENST00000464263 DYRK1AQ13627 763 aa12.18□□□□□ -0.46
RAB11FIP3-208ENST00000464263 PDPNQ86YL7 162 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms