RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 KCNE4Q8WWG9 221 aa6.34□□□□□ -1.39
SYNPO2-203ENST00000434046 UCN2Q96RP3 112 aa6.34□□□□□ -1.39
SYNPO2-203ENST00000434046 ZFP30Q9Y2G7 519 aa6.34□□□□□ -1.39
SYNPO2-203ENST00000434046 WIPI2Q9Y4P8 454 aa6.34□□□□□ -1.39
SYNPO2-203ENST00000434046 IGLV3-12A0A075B6K2 115 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 KIR2DS1A0A191URI9 304 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 A8MXE2 369 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 NUPR1O60356 82 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 CLPSP04118 112 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 ADMP35318 185 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 PLA2G5P39877 138 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 KIR2DS4P43632 304 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 SLC35B1P78383 322 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 MRPS11P82912 194 aaKnown RBP6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 SERF2P84101 59 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 KIR2DS1Q14954 304 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 CEACAM16Q2WEN9 425 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 KIAA1644Q3SXP7 199 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 ACTL10Q5JWF8 245 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 ST6GALNAC3Q8NDV1 305 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 ZNF596Q8TC21 504 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 RNASE8Q8TDE3 154 aaKnown RBP6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 TAF15Q92804 592 aaKnown RBP eCLIP6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 WNT10AQ9GZT5 417 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 BET1LQ9NYM9 111 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 NAT8BQ9UHF3 227 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 IGKV1D-13A0A0B4J2D9 117 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 SNURFLB1AK76 121 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 TRAPPC2LH3BP13 241 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 KRASP01116 189 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 UMODP07911 640 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 C1QTNF9P0C862 333 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 IGKV1-13P0DP09 117 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 SRD5A2P31213 254 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 CDKN1AP38936 164 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 ID3Q02535 119 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 GAGE1Q13065 139 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 MRPL49Q13405 166 aaKnown RBP6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 RAB35Q15286 201 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 ZNF726P1Q15940 193 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 MKXQ8IYA7 352 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 ZDHHC23Q8IYP9 409 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 WDYHV1Q96HA8 205 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 B3GAT1Q9P2W7 334 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 IGHV1-45A0A0A0MS14 117 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 CTXND1A0A1B0GTU2 59 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 ZNF814B7Z6K7 855 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 TRAF3IP2O43734 574 aaPredicted RBP6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 SLC25A6P12236 298 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 LIFP15018 202 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 NPBWR2P48146 333 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 EDDM3BP56851 147 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 PAFAH1B2P68402 229 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 PCOLCEQ15113 449 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 ATP6V1FQ16864 119 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 SLC25A47Q6Q0C1 308 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 UNQ5815/PRO19632Q6UWF5 114 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 SMIM15Q7Z3B0 74 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 ZNF738Q8NE65 137 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 NFAM1Q8NET5 270 aaPredicted RBP6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 OR10P1Q8NGE3 313 aa6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 ALKBH7Q9BT30 221 aaPredicted RBP6.33□□□□□ -1.4
SYNPO2-203ENST00000434046 SPTBN5Q9NRC6 3674 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 IGHV3-64DA0A0J9YX35 117 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 AQP7P3A6NL99 342 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 LILRA1O75019 489 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 CRYABP02511 175 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 CYC1P08574 325 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 F2RP25116 425 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 TCL1AP56279 114 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 RAC3P60763 192 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 ZFP36L1Q07352 338 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 SPINK14Q6IE38 97 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 ZNF525Q8N782 197 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 ZNF439Q8NDP4 499 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 OR5D13Q8NGL4 314 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 OR10G8Q8NGN5 311 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 NANOS1Q8WY41 292 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 MRPL18Q9H0U6 180 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 GCM1Q9NP62 436 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 MRPS18CQ9Y3D5 142 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 A0A096LPE4 126 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 TRAV1-1A0A0B4J248 108 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 KIR2DL5BA0A0G2JN68 375 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 KIR2DL5BA0A0G2JPC4 375 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 A0A0U1RQV5 110 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 A0A1W2PPZ6 126 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 SLC22A20A6NK97 555 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 TMEM250H0YL14 139 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 CDC34P49427 236 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 CCL11P51671 97 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 PDLIM3Q53GG5 364 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 TMEM211Q6ICI0 200 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 SLC23A3Q6PIS1 610 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 KIR2DL5AQ8N109 375 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 RPP25LQ8N5L8 163 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 KLHDC1Q8N7A1 406 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 TMEM178AQ8NBL3 297 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 OR4B1Q8NGF8 309 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 OR10D3Q8NH80 312 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms