RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 SAXO1Q8IYX7 474 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 PNRC2Q9NPJ4 139 aaKnown RBP8.25□□□□□ -1.09
CMSS1-201ENST00000421999 MTCH1Q9NZJ7 389 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 GNG13Q9P2W3 67 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 PRNDQ9UKY0 176 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 JMJD1CQ15652 2540 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 EPG5Q9HCE0 2579 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 FAM90A10PA6NDY2 464 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 FAM90A18PA6NE21 464 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 FAM90A16PA6NEW6 464 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 FAM90A20PA6NIJ5 464 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 FAM90A8PA6NJQ4 464 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 FAM90A7PA6NKC0 464 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 FAM90A22PA8MWA6 464 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 FAM90A12PA8MX19 464 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 FAM90A5PA8MXJ8 464 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 FAM90A23PA8MXZ1 464 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 IQCF6A8MYZ5 107 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 TAAR5O14804 337 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 NUPL2O15504 423 aaKnown RBP8.25□□□□□ -1.09
CMSS1-201ENST00000421999 FAM90A15PP0C7V4 464 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 FAM90A13PP0C7W8 464 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 FAM90A14PP0C7W9 464 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 FAM90A24PP0C7X0 464 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 WNT5AP41221 380 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 RPL27AP46776 148 aaKnown RBP8.25□□□□□ -1.09
CMSS1-201ENST00000421999 LYZP61626 148 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 FLI1Q01543 452 aaPredicted RBP8.25□□□□□ -1.09
CMSS1-201ENST00000421999 IGFL2Q6UWQ7 119 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 ACP7Q6ZNF0 438 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 SAT2Q96F10 170 aaPredicted RBP8.25□□□□□ -1.09
CMSS1-201ENST00000421999 GRAMD2BQ96HH9 432 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 TLNRD1Q9H1K6 362 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 RAB18Q9NP72 206 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 MED9Q9NWA0 146 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 TIMM9Q9Y5J7 89 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 INHBBP09529 407 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 SLC25A4P12235 298 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 SLC6A1P30531 599 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 OR4D10Q8NGI6 311 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 OR5C1Q8NGR4 320 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 MALSU1Q96EH3 234 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 Q96M66 194 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 TMEM208Q9BTX3 173 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 CRIM1Q9NZV1 1036 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 ZNF729A6NN14 1252 aaPredicted RBP8.24□□□□□ -1.09
CMSS1-201ENST00000421999 WISP2O76076 250 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 SLC35B1P78383 322 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 ZNF260Q3ZCT1 412 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 ZNF787Q6DD87 383 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 OR2C3Q8N628 320 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 OR10Z1Q8NGY1 313 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 DTD1Q8TEA8 209 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 MITD1Q8WV92 249 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 NDFIP1Q9BT67 221 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 NPAP1Q9NZP6 1156 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 METTL1Q9UBP6 276 aaKnown RBP8.24□□□□□ -1.09
CMSS1-201ENST00000421999 SLC25A15Q9Y619 301 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 AUP1Q9Y679 476 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 TMEM14DPA8MWL7 114 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 CEACAM4O75871 244 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 ZNF14P17017 642 aaPredicted RBP8.24□□□□□ -1.09
CMSS1-201ENST00000421999 UNC119Q13432 240 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 NCR3LG1Q68D85 454 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 ZNF788Q6ZQV5 615 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 LYZL2Q7Z4W2 148 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 BAP18Q8IXM2 172 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 OR5M8Q8NGP6 311 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 DCTN5Q9BTE1 182 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 SLC25A32Q9H2D1 315 aa8.24□□□□□ -1.09
CMSS1-201ENST00000421999 ZMAT5Q9UDW3 170 aaKnown RBP8.24□□□□□ -1.09
CMSS1-201ENST00000421999 MYO9AB2RTY4 2548 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 LY6HO94772 140 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 PLA2G5P39877 138 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 UBE2KP61086 200 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 ZNF672Q499Z4 452 aaPredicted RBP8.23□□□□□ -1.09
CMSS1-201ENST00000421999 ZNF418Q8TF45 676 aaPredicted RBP8.23□□□□□ -1.09
CMSS1-201ENST00000421999 PRR14LQ5THK1 2151 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 COL4A2P08572 1712 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 C1QBP02746 253 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 IGFBP3P17936 291 aaPredicted RBP8.23□□□□□ -1.09
CMSS1-201ENST00000421999 UBE2G2P60604 165 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 KLF9Q13886 244 aaPredicted RBP8.23□□□□□ -1.09
CMSS1-201ENST00000421999 HABP2Q14520 560 aaPredicted RBP8.23□□□□□ -1.09
CMSS1-201ENST00000421999 HAGHQ16775 308 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 UNQ5815/PRO19632Q6UWF5 114 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 FAM219AQ8IW50 185 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 WASHC3Q9Y3C0 194 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 EML5Q05BV3 1969 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 E9PQ18 207 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 CHST1O43916 411 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 MBP02144 154 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 TOR2AQ5JU69 321 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 OR5R1Q8NH85 324 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 LILRB1Q8NHL6 650 aaPredicted RBP8.23□□□□□ -1.09
CMSS1-201ENST00000421999 DYNLRB2Q8TF09 96 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 TLN2Q9Y4G6 2542 aa8.23□□□□□ -1.09
CMSS1-201ENST00000421999 MDFIC2A0A1B0GVS7 189 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 FBP1P09467 338 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 TRAPPC2P0DI81 140 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms