RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 MOB4Q9Y3A3 225 aa16.21■□□□□ 0.19
PTCD3-202ENST00000409326 OR2W1Q9Y3N9 320 aa16.21■□□□□ 0.19
PTCD3-202ENST00000409326 RBM7Q9Y580 266 aaKnown RBP16.21■□□□□ 0.19
PTCD3-202ENST00000409326 CLPSL1A2RUU4 121 aa16.2■□□□□ 0.18
PTCD3-202ENST00000409326 DPPA5A6NC42 116 aa16.2■□□□□ 0.18
PTCD3-202ENST00000409326 PROP1O75360 226 aa16.2■□□□□ 0.18
PTCD3-202ENST00000409326 TUSC2O75896 110 aa16.2■□□□□ 0.18
PTCD3-202ENST00000409326 MOSP00540 346 aa16.2■□□□□ 0.18
PTCD3-202ENST00000409326 CT45A6P0DMU7 189 aa16.2■□□□□ 0.18
PTCD3-202ENST00000409326 CT45A5P0DMU8 189 aa16.2■□□□□ 0.18
PTCD3-202ENST00000409326 CT45A7P0DMV0 189 aa16.2■□□□□ 0.18
PTCD3-202ENST00000409326 HNF4GQ14541 408 aa16.2■□□□□ 0.18
PTCD3-202ENST00000409326 CDK10Q15131 360 aa16.2■□□□□ 0.18
PTCD3-202ENST00000409326 DGCR14Q96DF8 476 aaKnown RBP16.2■□□□□ 0.18
PTCD3-202ENST00000409326 DIRAS2Q96HU8 199 aa16.2■□□□□ 0.18
PTCD3-202ENST00000409326 ABHD1Q96SE0 405 aa16.2■□□□□ 0.18
PTCD3-202ENST00000409326 ZNF702PQ9H963 129 aa16.2■□□□□ 0.18
PTCD3-202ENST00000409326 M0QZK8 103 aa16.19■□□□□ 0.18
PTCD3-202ENST00000409326 OR5H8P0DN80 308 aa16.19■□□□□ 0.18
PTCD3-202ENST00000409326 TAS2R46P59540 309 aa16.19■□□□□ 0.18
PTCD3-202ENST00000409326 Q8N2B8 174 aa16.19■□□□□ 0.18
PTCD3-202ENST00000409326 PRSS22Q9GZN4 317 aa16.19■□□□□ 0.18
PTCD3-202ENST00000409326 SDHAF2Q9NX18 166 aa16.19■□□□□ 0.18
PTCD3-202ENST00000409326 RABL2AQ9UBK7 228 aaPredicted RBP16.19■□□□□ 0.18
PTCD3-202ENST00000409326 RABL2BQ9UNT1 228 aa16.19■□□□□ 0.18
PTCD3-202ENST00000409326 A3GALT2U3KPV4 340 aa16.19■□□□□ 0.18
PTCD3-202ENST00000409326 OR5H14A6NHG9 310 aa16.18■□□□□ 0.18
PTCD3-202ENST00000409326 AMY1AP04745 511 aa16.18■□□□□ 0.18
PTCD3-202ENST00000409326 AMY2AP04746 511 aa16.18■□□□□ 0.18
PTCD3-202ENST00000409326 RCVRNP35243 200 aa16.18■□□□□ 0.18
PTCD3-202ENST00000409326 LUMP51884 338 aaPredicted RBP16.18■□□□□ 0.18
PTCD3-202ENST00000409326 BLCAPP62952 87 aa16.18■□□□□ 0.18
PTCD3-202ENST00000409326 OR5AN1Q8NGI8 311 aa16.18■□□□□ 0.18
PTCD3-202ENST00000409326 OR2T6Q8NHC8 308 aa16.18■□□□□ 0.18
PTCD3-202ENST00000409326 C5orf30Q96GV9 206 aa16.18■□□□□ 0.18
PTCD3-202ENST00000409326 MMP27Q9H306 513 aa16.18■□□□□ 0.18
PTCD3-202ENST00000409326 RNF114Q9Y508 228 aa16.18■□□□□ 0.18
PTCD3-202ENST00000409326 IGKV1D-13A0A0B4J2D9 117 aa16.17■□□□□ 0.18
PTCD3-202ENST00000409326 H0YJW9 148 aa16.17■□□□□ 0.18
PTCD3-202ENST00000409326 M0R1X1 148 aa16.17■□□□□ 0.18
PTCD3-202ENST00000409326 FGF16O43320 207 aa16.17■□□□□ 0.18
PTCD3-202ENST00000409326 IGKV1-13P0DP09 117 aa16.17■□□□□ 0.18
PTCD3-202ENST00000409326 FCGR2CP31995 323 aa16.17■□□□□ 0.18
PTCD3-202ENST00000409326 RNASE12Q5GAN4 147 aaKnown RBP16.17■□□□□ 0.18
PTCD3-202ENST00000409326 FOXB2Q5VYV0 432 aa16.17■□□□□ 0.18
PTCD3-202ENST00000409326 PYHIN1Q6K0P9 492 aa16.17■□□□□ 0.18
PTCD3-202ENST00000409326 C11orf88Q6PI97 169 aa16.17■□□□□ 0.18
PTCD3-202ENST00000409326 FAM131AQ6UXB0 335 aa16.17■□□□□ 0.18
PTCD3-202ENST00000409326 GLDNQ6ZMI3 551 aaPredicted RBP16.17■□□□□ 0.18
PTCD3-202ENST00000409326 OVCH2Q7RTZ1 564 aa16.17■□□□□ 0.18
PTCD3-202ENST00000409326 LYSMD2Q8IV50 215 aa16.17■□□□□ 0.18
PTCD3-202ENST00000409326 ZNF645Q8N7E2 425 aa16.17■□□□□ 0.18
PTCD3-202ENST00000409326 C5orf56Q8N8D9 126 aa16.17■□□□□ 0.18
PTCD3-202ENST00000409326 DRAXINQ8NBI3 349 aaPredicted RBP16.17■□□□□ 0.18
PTCD3-202ENST00000409326 OR5H2Q8NGV7 314 aa16.17■□□□□ 0.18
PTCD3-202ENST00000409326 OR52I2Q8NH67 350 aa16.17■□□□□ 0.18
PTCD3-202ENST00000409326 EHFQ9NZC4 300 aa16.17■□□□□ 0.18
PTCD3-202ENST00000409326 J3QRK9 145 aa16.16■□□□□ 0.18
PTCD3-202ENST00000409326 SLC22A5O76082 557 aa16.16■□□□□ 0.18
PTCD3-202ENST00000409326 PPYP01298 95 aa16.16■□□□□ 0.18
PTCD3-202ENST00000409326 PMP2P02689 132 aa16.16■□□□□ 0.18
PTCD3-202ENST00000409326 AADACP22760 399 aa16.16■□□□□ 0.18
PTCD3-202ENST00000409326 HLA-DMAP28067 261 aa16.16■□□□□ 0.18
PTCD3-202ENST00000409326 TNFSF8P32971 234 aa16.16■□□□□ 0.18
PTCD3-202ENST00000409326 MC5RP33032 325 aa16.16■□□□□ 0.18
PTCD3-202ENST00000409326 PROK1P58294 105 aa16.16■□□□□ 0.18
PTCD3-202ENST00000409326 ACTBP60709 375 aa16.16■□□□□ 0.18
PTCD3-202ENST00000409326 MRPS10P82664 201 aaKnown RBP16.16■□□□□ 0.18
PTCD3-202ENST00000409326 DYRK1AQ13627 763 aa16.16■□□□□ 0.18
PTCD3-202ENST00000409326 IL18Q14116 193 aa16.16■□□□□ 0.18
PTCD3-202ENST00000409326 Q6ZS46 218 aa16.16■□□□□ 0.18
PTCD3-202ENST00000409326 ZNF383Q8NA42 475 aa16.16■□□□□ 0.18
PTCD3-202ENST00000409326 OR8H1Q8NGG4 311 aa16.16■□□□□ 0.18
PTCD3-202ENST00000409326 RBMXL1Q96E39 390 aaKnown RBP16.16■□□□□ 0.18
PTCD3-202ENST00000409326 SIGLEC9Q9Y336 463 aa16.16■□□□□ 0.18
PTCD3-202ENST00000409326 WASHC3Q9Y3C0 194 aa16.16■□□□□ 0.18
PTCD3-202ENST00000409326 GABARAPH6UMI1 98 aa16.15■□□□□ 0.18
PTCD3-202ENST00000409326 CTDSPLO15194 276 aa16.15■□□□□ 0.18
PTCD3-202ENST00000409326 HRH1P35367 487 aa16.15■□□□□ 0.18
PTCD3-202ENST00000409326 RFX2P48378 723 aa16.15■□□□□ 0.18
PTCD3-202ENST00000409326 ABCA11PQ4W5N1 156 aa16.15■□□□□ 0.18
PTCD3-202ENST00000409326 C3orf56Q8N813 242 aa16.15■□□□□ 0.18
PTCD3-202ENST00000409326 GIMAP1Q8WWP7 306 aa16.15■□□□□ 0.18
PTCD3-202ENST00000409326 FCAMRQ8WWV6 532 aa16.15■□□□□ 0.18
PTCD3-202ENST00000409326 PLSCR3Q9NRY6 295 aa16.15■□□□□ 0.18
PTCD3-202ENST00000409326 KLK11Q9UBX7 282 aa16.15■□□□□ 0.18
PTCD3-202ENST00000409326 MTFP1Q9UDX5 166 aa16.15■□□□□ 0.18
PTCD3-202ENST00000409326 NCBP2LA6PVI3 153 aaKnown RBP16.14■□□□□ 0.17
PTCD3-202ENST00000409326 RBBP9O75884 186 aa16.14■□□□□ 0.17
PTCD3-202ENST00000409326 IGLV2-14P01704 120 aa16.14■□□□□ 0.17
PTCD3-202ENST00000409326 LINC00205P59089 165 aa16.14■□□□□ 0.17
PTCD3-202ENST00000409326 DGCR2P98153 550 aa16.14■□□□□ 0.17
PTCD3-202ENST00000409326 ZNF660Q6AZW8 331 aaPredicted RBP16.14■□□□□ 0.17
PTCD3-202ENST00000409326 DHRS11Q6UWP2 260 aa16.14■□□□□ 0.17
PTCD3-202ENST00000409326 Q8N9W7 124 aa16.14■□□□□ 0.17
PTCD3-202ENST00000409326 SMIM4Q8WVI0 70 aa16.14■□□□□ 0.17
PTCD3-202ENST00000409326 WFDC12Q8WWY7 111 aa16.14■□□□□ 0.17
PTCD3-202ENST00000409326 ZNF747Q9BV97 191 aa16.14■□□□□ 0.17
PTCD3-202ENST00000409326 SH2D7A6NKC9 451 aaPredicted RBP16.13■□□□□ 0.17
PTCD3-202ENST00000409326 H7C2Y5 167 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms