RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 GUCD1Q96NT3 240 aa11.69□□□□□ -0.54
LDLRAD4-203ENST00000399848 SHANK1Q9Y566 2161 aa11.69□□□□□ -0.54
LDLRAD4-203ENST00000399848 STRCP1A6NGW2 1772 aa11.69□□□□□ -0.54
LDLRAD4-203ENST00000399848 COMPP49747 757 aaPredicted RBP11.69□□□□□ -0.54
LDLRAD4-203ENST00000399848 MMP16P51512 607 aa11.69□□□□□ -0.54
LDLRAD4-203ENST00000399848 PRSS8Q16651 343 aa11.69□□□□□ -0.54
LDLRAD4-203ENST00000399848 VAX1Q5SQQ9 334 aa11.69□□□□□ -0.54
LDLRAD4-203ENST00000399848 HSPB7Q9UBY9 170 aa11.69□□□□□ -0.54
LDLRAD4-203ENST00000399848 S1PR2O95136 353 aa11.69□□□□□ -0.54
LDLRAD4-203ENST00000399848 RBM11P57052 281 aaKnown RBP11.69□□□□□ -0.54
LDLRAD4-203ENST00000399848 XIRP1Q702N8 1843 aaKnown RBP11.69□□□□□ -0.54
LDLRAD4-203ENST00000399848 EML2O95834 649 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 CD74P04233 296 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 TEX30Q5JUR7 227 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 GPR35Q9HC97 309 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 LEPROTL1O95214 131 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 IGFBP6P24592 240 aaPredicted RBP11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 MAGEA5P43359 124 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 ZFP36L2P47974 494 aaKnown RBP11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 ZIC1Q15915 447 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 VN1R4Q7Z5H5 301 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 GALNT14Q96FL9 552 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 RNASE1P07998 156 aaKnown RBP11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 MC5RP33032 325 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 SPAARA0A1B0GVQ0 90 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 C16orf47Q6ZP98 133 aaPredicted RBP11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 ZNF714Q96N38 554 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 FOXD3Q9UJU5 478 aaPredicted RBP11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 TMEM56-RWDD3S4R434 201 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 BRCA1P38398 1863 aaKnown RBP11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 TRAV8-7A0A075B6U6 113 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 ZNF98A6NK75 572 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 FBXW9Q5XUX1 488 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 TMEM136Q6ZRR5 245 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 ZNF645Q8N7E2 425 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 OR10AG1Q8NH19 301 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 SH3BGRL3Q9H299 93 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 PNLIPP16233 465 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 LGALS3P17931 250 aaKnown RBP11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 AURKAIP1Q9NWT8 199 aaPredicted RBP11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 FAM106CPP0CH98 169 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 FOLR2P14207 255 aa11.68□□□□□ -0.54
LDLRAD4-203ENST00000399848 AMY1AP04745 511 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 LOXL3P58215 753 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 CD300CQ08708 224 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 RGP1Q92546 391 aaPredicted RBP11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 IGHV1OR15-9A0A0B4J2B8 117 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 PRR33A8MZF0 331 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 ADAMTS17Q8TE56 1095 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 PMCHL2Q9BQD1 86 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 TMEM8BA6NDV4 472 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 HSPB1P04792 205 aaKnown RBP11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 WDR54Q9H977 334 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 TRBV9A0A0B4J1U6 114 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 A0A1W2PRD5 423 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 A0A1W2PRF3 423 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 A0A1W2PRM7 423 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 CISD3P0C7P0 127 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 TCF24Q7RTU0 167 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 OVCH2Q7RTZ1 564 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 TNFSF10P50591 281 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 PSG6Q00889 435 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 HIKESHIQ53FT3 197 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 PQLC2Q6ZP29 291 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 WFDC3Q8IUB2 231 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 TMEM45BQ96B21 275 aa11.67□□□□□ -0.54
LDLRAD4-203ENST00000399848 LOC285556D6RIA3 1793 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 LNP1A1A4G5 178 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 C16orf97H3BN30 126 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 LIFP15018 202 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 MIXL1Q9H2W2 232 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 ZNF205O95201 554 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 COL10A1Q03692 680 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 VSIG8P0DPA2 414 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 RCC1P18754 421 aaPredicted RBP11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 LAMTOR1Q6IAA8 161 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 R3HDMLQ9H3Y0 253 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 FLRT3Q9NZU0 649 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 NDUFB4O95168 129 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 NXPH1P58417 271 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 FAM131CQ96AQ9 280 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 CFDP00746 253 aaPredicted RBP11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 HOXB3P14651 431 aaPredicted RBP11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 PDLIM4P50479 330 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 IL36RNQ9UBH0 155 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 IGHV3OR15-7A0A075B7D8 119 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 PSG9Q00887 426 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 OR1P1Q8NH06 330 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 PTPMT1Q8WUK0 201 aaPredicted RBP11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 SOSTQ9BQB4 213 aa11.66□□□□□ -0.54
LDLRAD4-203ENST00000399848 EMP1P54849 157 aa11.65□□□□□ -0.54
LDLRAD4-203ENST00000399848 FAM209AQ5JX71 171 aa11.65□□□□□ -0.54
LDLRAD4-203ENST00000399848 PARD6GQ9BYG4 376 aaPredicted RBP11.65□□□□□ -0.54
LDLRAD4-203ENST00000399848 RALGAPA2Q2PPJ7 1873 aa11.65□□□□□ -0.54
LDLRAD4-203ENST00000399848 DOCK4Q8N1I0 1966 aa11.65□□□□□ -0.54
LDLRAD4-203ENST00000399848 MUC1P15941 1255 aaPredicted RBP11.65□□□□□ -0.54
LDLRAD4-203ENST00000399848 TUBD1Q9UJT1 453 aa11.65□□□□□ -0.54
LDLRAD4-203ENST00000399848 HLA-DRB1P01911 266 aa11.65□□□□□ -0.54
LDLRAD4-203ENST00000399848 PRSS2P07478 247 aa11.65□□□□□ -0.54
LDLRAD4-203ENST00000399848 PRDX2P32119 198 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms