RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 NFAM1Q8NET5 270 aaPredicted RBP5.57□□□□□ -1.52
NEDD9-202ENST00000379446 STXBP6Q8NFX7 210 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 OTOSQ8NHW6 89 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 POM121L2Q96KW2 1035 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 GFI1Q99684 422 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 KLHDC3Q9BQ90 382 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 LRP12Q9Y561 859 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 MALRD1Q5VYJ5 2156 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 IGKV1D-42A0A075B6H8 117 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 TMEM272A0A1B0GTI8 110 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 TMEM210A6NLX4 147 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 HMSDA8MTL9 139 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 CTDSPLO15194 276 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 OR8U8P0C7N1 319 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 TAGLN2P37802 199 aaKnown RBP5.57□□□□□ -1.52
NEDD9-202ENST00000379446 MFGE8Q08431 387 aaPredicted RBP5.57□□□□□ -1.52
NEDD9-202ENST00000379446 PJVKQ0ZLH3 352 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 SOHLH1Q5JUK2 328 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 LINC01590Q5TEZ4 76 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 FAM27BQ5VT28 67 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 ZNF385CQ66K41 422 aaPredicted RBP5.57□□□□□ -1.52
NEDD9-202ENST00000379446 ZNF474Q6S9Z5 364 aaPredicted RBP5.57□□□□□ -1.52
NEDD9-202ENST00000379446 FAM216BQ8N7L0 139 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 SUMF2Q8NBJ7 301 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 DDB2Q92466 427 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 OR8B4Q96RC9 309 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 SLC25A22Q9H936 323 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 TICRRQ7Z2Z1 1910 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 IGHV3-21A0A0B4J1V1 117 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 hCG_38984A0A1B0GV85 526 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 A0A1W2PN81 502 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 PSMB11A5LHX3 300 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 LRRC3CA6NJW4 275 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 CEACAM18A8MTB9 384 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 MPTX1A8MV57 137 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 MGST3O14880 152 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 ADAP1O75689 374 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 KRASP01116 189 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 AGAP20933 346 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 FUT3P21217 361 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 CHRNA7P36544 502 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 KIR3DL2P43630 455 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 ADGRE4PQ86SQ3 457 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 GVQW1Q8N7I0 195 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 CTHRC1Q96CG8 243 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 RBM14Q96PK6 669 aaKnown RBP5.56□□□□□ -1.52
NEDD9-202ENST00000379446 ZDHHC11Q9H8X9 412 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 TAF9BQ9HBM6 251 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 IGKV3D-11A0A0A0MRZ8 115 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 PQLC2LA1A4F0 135 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 ZNF727A8MUV8 499 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 K7N7A8 449 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 SLC17A2O00624 439 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 SCGB1D1O95968 90 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 IL5P05113 134 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 PSMB6P28072 239 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 GPX4P36969 197 aaPredicted RBP5.56□□□□□ -1.52
NEDD9-202ENST00000379446 SLC25A1P53007 311 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 GAMTQ14353 236 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 HAGHQ16775 308 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 TRAT1Q6PIZ9 186 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 KIR3DL3Q8N743 410 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 SIGLECL1Q8N7X8 197 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 NKAIN3Q8N8D7 197 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 OR10S1Q8NGN2 331 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 FLVCR1-AS1Q8TAF5 88 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 VSTM2AQ8TAG5 236 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 ERGIC1Q969X5 290 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 DAZAP1Q96EP5 407 aaKnown RBP5.56□□□□□ -1.52
NEDD9-202ENST00000379446 SLC25A33Q9BSK2 321 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 LIME1Q9H400 295 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 RNF122Q9H9V4 155 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 ALPK3Q96L96 1907 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 RCC1P18754 421 aaPredicted RBP5.56□□□□□ -1.52
NEDD9-202ENST00000379446 TAS2R46P59540 309 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 PPP1R1AQ13522 171 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 HABP2Q14520 560 aaPredicted RBP5.56□□□□□ -1.52
NEDD9-202ENST00000379446 LRRC75BQ2VPJ9 315 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 THNSL2Q86YJ6 484 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 PRSS35Q8N3Z0 413 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 NECAP1Q8NC96 275 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 ZNRF1Q8ND25 227 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 PLSCR4Q9NRQ2 329 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 NAGKQ9UJ70 344 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 PSPNO60542 156 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 RAB5AP20339 215 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 MPV17P39210 176 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 RPL29P47914 159 aaKnown RBP5.56□□□□□ -1.52
NEDD9-202ENST00000379446 EGR3Q06889 387 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 RPL7L1Q6DKI1 246 aaKnown RBP5.56□□□□□ -1.52
NEDD9-202ENST00000379446 OR8G2PQ6IF36 304 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 NRIP2Q9BQI9 281 aa5.56□□□□□ -1.52
NEDD9-202ENST00000379446 NPDC1Q9NQX5 325 aaPredicted RBP5.56□□□□□ -1.52
NEDD9-202ENST00000379446 IGKV3-20P01619 116 aa5.55□□□□□ -1.52
NEDD9-202ENST00000379446 MT-ND4LP03901 98 aa5.55□□□□□ -1.52
NEDD9-202ENST00000379446 RIPPLY3P57055 190 aa5.55□□□□□ -1.52
NEDD9-202ENST00000379446 FAM120AOSQ5T036 256 aa5.55□□□□□ -1.52
NEDD9-202ENST00000379446 EBLN2Q6P2I7 272 aa5.55□□□□□ -1.52
NEDD9-202ENST00000379446 C1QL4Q86Z23 238 aa5.55□□□□□ -1.52
NEDD9-202ENST00000379446 ZIC4Q8N9L1 334 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms