RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 TMEM268Q5VZI3 342 aa17.42■□□□□ 0.38
HLA-C-201ENST00000376228 ZNF546Q86UE3 836 aa17.42■□□□□ 0.38
HLA-C-201ENST00000376228 ZNF695Q8IW36 515 aa17.42■□□□□ 0.38
HLA-C-201ENST00000376228 RBPMSQ93062 196 aaKnown RBP17.42■□□□□ 0.38
HLA-C-201ENST00000376228 OR2D2Q9H210 308 aa17.42■□□□□ 0.38
HLA-C-201ENST00000376228 LIN7CQ9NUP9 197 aaKnown RBP17.42■□□□□ 0.38
HLA-C-201ENST00000376228 GFOD1Q9NXC2 390 aa17.42■□□□□ 0.38
HLA-C-201ENST00000376228 GNG12Q9UBI6 72 aa17.42■□□□□ 0.38
HLA-C-201ENST00000376228 KCNS2Q9ULS6 477 aa17.42■□□□□ 0.38
HLA-C-201ENST00000376228 TNFSF18Q9UNG2 199 aa17.42■□□□□ 0.38
HLA-C-201ENST00000376228 ARPC5O15511 151 aa17.41■□□□□ 0.38
HLA-C-201ENST00000376228 FCN3O75636 299 aa17.41■□□□□ 0.38
HLA-C-201ENST00000376228 NDUFB7P17568 137 aa17.41■□□□□ 0.38
HLA-C-201ENST00000376228 ZNF345Q14585 488 aa17.41■□□□□ 0.38
HLA-C-201ENST00000376228 LYPD2Q6UXB3 125 aa17.41■□□□□ 0.38
HLA-C-201ENST00000376228 SLC35G3Q8N808 338 aa17.41■□□□□ 0.38
HLA-C-201ENST00000376228 RNF126Q9BV68 326 aa17.41■□□□□ 0.38
HLA-C-201ENST00000376228 ZFP57Q9NU63 452 aa17.41■□□□□ 0.38
HLA-C-201ENST00000376228 IDI2-AS1Q9NZ38 188 aa17.41■□□□□ 0.38
HLA-C-201ENST00000376228 DOCK11Q5JSL3 2073 aa17.41■□□□□ 0.38
HLA-C-201ENST00000376228 YLPM1P49750 1951 aaKnown RBP17.4■□□□□ 0.38
HLA-C-201ENST00000376228 IGHV3-43A0A0B4J1X8 118 aa17.4■□□□□ 0.38
HLA-C-201ENST00000376228 TNFSF12O43508 249 aa17.4■□□□□ 0.38
HLA-C-201ENST00000376228 PET100P0DJ07 73 aa17.4■□□□□ 0.38
HLA-C-201ENST00000376228 IGHV3-43DP0DP04 118 aa17.4■□□□□ 0.38
HLA-C-201ENST00000376228 VDAC1P21796 283 aa17.4■□□□□ 0.38
HLA-C-201ENST00000376228 PRSS54Q6PEW0 395 aa17.4■□□□□ 0.38
HLA-C-201ENST00000376228 ZNF66Q6ZN08 573 aa17.4■□□□□ 0.38
HLA-C-201ENST00000376228 C10orf105Q8TEF2 133 aa17.4■□□□□ 0.38
HLA-C-201ENST00000376228 HEXA-AS1Q9H8Q6 139 aa17.4■□□□□ 0.38
HLA-C-201ENST00000376228 CTSZQ9UBR2 303 aa17.4■□□□□ 0.38
HLA-C-201ENST00000376228 PAIP2BQ9ULR5 123 aaKnown RBP17.4■□□□□ 0.38
HLA-C-201ENST00000376228 SETD2Q9BYW2 2564 aaPredicted RBP17.4■□□□□ 0.38
HLA-C-201ENST00000376228 A0A0D9SG52 128 aa17.39■□□□□ 0.37
HLA-C-201ENST00000376228 GPR37O15354 613 aa17.39■□□□□ 0.37
HLA-C-201ENST00000376228 OR2F2O95006 317 aa17.39■□□□□ 0.37
HLA-C-201ENST00000376228 RAB7AP51149 207 aa17.39■□□□□ 0.37
HLA-C-201ENST00000376228 DSCR9P59020 149 aa17.39■□□□□ 0.37
HLA-C-201ENST00000376228 RPL31P62899 125 aaKnown RBP17.39■□□□□ 0.37
HLA-C-201ENST00000376228 OR2F1Q13607 317 aa17.39■□□□□ 0.37
HLA-C-201ENST00000376228 LRRC37A5PQ49AS3 106 aa17.39■□□□□ 0.37
HLA-C-201ENST00000376228 FAM53AQ6NSI3 398 aaPredicted RBP17.39■□□□□ 0.37
HLA-C-201ENST00000376228 GPHA2Q96T91 129 aa17.39■□□□□ 0.37
HLA-C-201ENST00000376228 SPIN2AQ99865 258 aa17.39■□□□□ 0.37
HLA-C-201ENST00000376228 SPIN2BQ9BPZ2 258 aa17.39■□□□□ 0.37
HLA-C-201ENST00000376228 MFFQ9GZY8 342 aa17.39■□□□□ 0.37
HLA-C-201ENST00000376228 GAL3ST2Q9H3Q3 398 aa17.39■□□□□ 0.37
HLA-C-201ENST00000376228 NF1P21359 2839 aa17.38■□□□□ 0.37
HLA-C-201ENST00000376228 DVL1O14640 695 aa17.38■□□□□ 0.37
HLA-C-201ENST00000376228 SLC25A6P12236 298 aa17.38■□□□□ 0.37
HLA-C-201ENST00000376228 S100A11P31949 105 aa17.38■□□□□ 0.37
HLA-C-201ENST00000376228 PDLIM4P50479 330 aa17.38■□□□□ 0.37
HLA-C-201ENST00000376228 CATR1Q13166 79 aa17.38■□□□□ 0.37
HLA-C-201ENST00000376228 OPCMLQ14982 345 aa17.38■□□□□ 0.37
HLA-C-201ENST00000376228 Q3ZCU0 254 aa17.38■□□□□ 0.37
HLA-C-201ENST00000376228 NMSQ5H8A3 153 aa17.38■□□□□ 0.37
HLA-C-201ENST00000376228 OR51H1Q8NH63 302 aa17.38■□□□□ 0.37
HLA-C-201ENST00000376228 C5orf30Q96GV9 206 aa17.38■□□□□ 0.37
HLA-C-201ENST00000376228 HSD17B10Q99714 261 aaKnown RBP17.38■□□□□ 0.37
HLA-C-201ENST00000376228 MBD2Q9UBB5 411 aa17.38■□□□□ 0.37
HLA-C-201ENST00000376228 A0A096LNT2 108 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 TRBV23-1A0A0A0MS06 115 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 H0YIZ8 118 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 SERPINE2P07093 398 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 DAOP14920 347 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 KRTAP1-1Q07627 177 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 RAB32Q13637 225 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 TMEM155Q4W5P6 130 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 ACOT7LQ6ZUV0 252 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 TMUB2Q71RG4 321 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 FGFRL1Q8N441 504 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.37■□□□□ 0.37
HLA-C-201ENST00000376228 C19orf12Q9NSK7 152 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 SDHAF2Q9NX18 166 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 GSKIPQ9P0R6 139 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 RPUSD1Q9UJJ7 312 aaKnown RBP17.37■□□□□ 0.37
HLA-C-201ENST00000376228 RNF150Q9ULK6 438 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 PSG11Q9UQ72 335 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 MEX3AA1L020 520 aaKnown RBP17.37■□□□□ 0.37
HLA-C-201ENST00000376228 LYNX1G3V0Z9 82 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 LYNX1P0DP58 116 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 ZNF585BQ52M93 769 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 TMEM200BQ69YZ2 307 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 HEPN1Q6WQI6 88 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 KCNRGQ8N5I3 272 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 ZNF439Q8NDP4 499 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 LSM10Q969L4 123 aaKnown RBP17.37■□□□□ 0.37
HLA-C-201ENST00000376228 ABHD14BQ96IU4 210 aa17.37■□□□□ 0.37
HLA-C-201ENST00000376228 TLN2Q9Y4G6 2542 aa17.36■□□□□ 0.37
HLA-C-201ENST00000376228 NIPBLQ6KC79 2804 aaeCLIP17.36■□□□□ 0.37
HLA-C-201ENST00000376228 CSPG4Q6UVK1 2322 aa17.36■□□□□ 0.37
HLA-C-201ENST00000376228 RNF222A6NCQ9 220 aa17.36■□□□□ 0.37
HLA-C-201ENST00000376228 ST8SIA5O15466 376 aa17.36■□□□□ 0.37
HLA-C-201ENST00000376228 SLC25A16P16260 332 aa17.36■□□□□ 0.37
HLA-C-201ENST00000376228 ZNF767PQ75MW2 155 aa17.36■□□□□ 0.37
HLA-C-201ENST00000376228 OR4D5Q8NGN0 318 aa17.36■□□□□ 0.37
HLA-C-201ENST00000376228 RAB1CQ92928 201 aa17.36■□□□□ 0.37
HLA-C-201ENST00000376228 TIMD4Q96H15 378 aa17.36■□□□□ 0.37
HLA-C-201ENST00000376228 ZNF714Q96N38 554 aa17.36■□□□□ 0.37
HLA-C-201ENST00000376228 PIMREGQ9BSJ6 248 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms