RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 POM121Q96HA1 1249 aa8.9□□□□□ -0.98
SMC3-201ENST00000361804 TECTBQ96PL2 329 aa8.9□□□□□ -0.98
SMC3-201ENST00000361804 OR4F4Q96R69 305 aa8.9□□□□□ -0.98
SMC3-201ENST00000361804 DERL1Q9BUN8 251 aa8.9□□□□□ -0.98
SMC3-201ENST00000361804 SIRT7Q9NRC8 400 aa8.9□□□□□ -0.98
SMC3-201ENST00000361804 GFOD1Q9NXC2 390 aa8.9□□□□□ -0.98
SMC3-201ENST00000361804 ARFGEF3Q5TH69 2177 aa8.9□□□□□ -0.98
SMC3-201ENST00000361804 RBMXL2O75526 392 aaKnown RBP8.9□□□□□ -0.98
SMC3-201ENST00000361804 IDH3GP51553 393 aaPredicted RBP8.9□□□□□ -0.98
SMC3-201ENST00000361804 FAM3BP58499 235 aaPredicted RBP8.9□□□□□ -0.98
SMC3-201ENST00000361804 OR1C1Q15619 314 aa8.9□□□□□ -0.98
SMC3-201ENST00000361804 DCAF12Q5T6F0 453 aa8.9□□□□□ -0.98
SMC3-201ENST00000361804 NCR3LG1Q68D85 454 aa8.9□□□□□ -0.98
SMC3-201ENST00000361804 ABHD14BQ96IU4 210 aa8.9□□□□□ -0.98
SMC3-201ENST00000361804 TMEM9BQ9NQ34 198 aa8.9□□□□□ -0.98
SMC3-201ENST00000361804 FAM90A10PA6NDY2 464 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 FAM90A18PA6NE21 464 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 FAM90A16PA6NEW6 464 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 FAM90A20PA6NIJ5 464 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 FAM90A8PA6NJQ4 464 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 FAM90A7PA6NKC0 464 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 C17orf98A8MV24 154 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 FAM90A22PA8MWA6 464 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 FAM90A12PA8MX19 464 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 FAM90A5PA8MXJ8 464 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 FAM90A23PA8MXZ1 464 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 NXPH2O95156 264 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 FAM90A15PP0C7V4 464 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 FAM90A13PP0C7W8 464 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 FAM90A14PP0C7W9 464 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 FAM90A24PP0C7X0 464 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 NDUFB7P17568 137 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 CHRNA7P36544 502 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 BRWD1-AS2P59051 145 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 METRNQ9UJH8 293 aa8.9□□□□□ -0.99
SMC3-201ENST00000361804 ZNF705GA8MUZ8 300 aaPredicted RBP8.89□□□□□ -0.99
SMC3-201ENST00000361804 SYNGR4O95473 234 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 PTBP3O95758 552 aaKnown RBP8.89□□□□□ -0.99
SMC3-201ENST00000361804 CD33P20138 364 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 RPL23P62829 140 aaKnown RBP8.89□□□□□ -0.99
SMC3-201ENST00000361804 GNB2P62879 340 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 PLP2Q04941 152 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 RNPS1Q15287 305 aaKnown RBP8.89□□□□□ -0.99
SMC3-201ENST00000361804 TMEM41BQ5BJD5 291 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 ALKBH2Q6NS38 261 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 PARLQ9H300 379 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 VAX2Q9UIW0 290 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 PAGE4O60829 102 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 SS18L1O75177 396 aaPredicted RBP8.89□□□□□ -0.99
SMC3-201ENST00000361804 AMBPP02760 352 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 SERPINA7P05543 415 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 CTXN2P0C2S0 81 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 C6orf15Q6UXA7 325 aaPredicted RBP8.89□□□□□ -0.99
SMC3-201ENST00000361804 SSX9Q7RTT3 188 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 ZNF573Q86YE8 665 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 IL17BQ9UHF5 180 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 BOKQ9UMX3 212 aaPredicted RBP8.89□□□□□ -0.99
SMC3-201ENST00000361804 EP300Q09472 2414 aaPredicted RBP8.89□□□□□ -0.99
SMC3-201ENST00000361804 A0A087X0M5 115 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 A0A1B0GX30 115 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 DUXBA0A1W2PPF3 345 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 LYZL6O75951 148 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 NPPCP23582 126 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 S100GP29377 79 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 OR8G1Q15617 311 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 DEFB123Q8N688 67 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 MRGPRDQ8TDS7 321 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 TMEM45BQ96B21 275 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 FUT9Q9Y231 359 aa8.89□□□□□ -0.99
SMC3-201ENST00000361804 IGKV3D-15A0A087WSY6 115 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 TRAV38-1A0A0B4J264 116 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 ODAMA1E959 279 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 CD59P13987 128 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 FGF7P21781 194 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 SSTR5P35346 364 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 RND2P52198 227 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 MEF2BQ02080 365 aaPredicted RBP8.88□□□□□ -0.99
SMC3-201ENST00000361804 ZNF66Q6ZN08 573 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 SAXO1Q8IYX7 474 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 MBD3L1Q8WWY6 194 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 IL22RA2Q969J5 263 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 WASF3Q9UPY6 502 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 TTC28Q96AY4 2481 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 TRAV1-1A0A0B4J248 108 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 TNFRSF9Q07011 255 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 FFAR4Q5NUL3 377 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 ABHD17BQ5VST6 288 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 ZNF497Q6ZNH5 498 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 VKORC1L1Q8N0U8 176 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 OR10A7Q8NGE5 316 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 ITPR1Q14643 2758 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 A0A0U1RQK1 487 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 SMCO3A2RU48 225 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 XKRY2A2RUG3 117 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.88□□□□□ -0.99
SMC3-201ENST00000361804 AGFG2O95081 481 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 DDTP30046 118 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 GALR1P47211 349 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 RNFT1Q5M7Z0 435 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 MCEMP1Q8IX19 187 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms