RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 TMEM171Q8WVE6 324 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 PINX1Q96BK5 328 aaKnown RBP3.41□□□□□ -1.86
CNGA1-201ENST00000358519 GNPNAT1Q96EK6 184 aaPredicted RBP3.41□□□□□ -1.86
CNGA1-201ENST00000358519 FOXN4Q96NZ1 517 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 OXGR1Q96P68 337 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 P2RX4Q99571 388 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 SMIM7Q9BQ49 75 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 FAM173AQ9BQD7 235 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 MEGF9Q9H1U4 602 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 OR51I2Q9H344 312 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 ZNF665Q9H7R5 613 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 PATZ1Q9HBE1 687 aaKnown RBP3.41□□□□□ -1.86
CNGA1-201ENST00000358519 ZNF160Q9HCG1 818 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 CLN8Q9UBY8 286 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 NAT8Q9UHE5 227 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 HHLA2Q9UM44 414 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 LOXL2Q9Y4K0 774 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 MPDZO75970 2070 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 KIAA2026Q5HYC2 2103 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 KNTC1P50748 2209 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 GON4LQ3T8J9 2241 aa3.41□□□□□ -1.86
CNGA1-201ENST00000358519 IGKV3D-15A0A087WSY6 115 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 TMED7-TICAM2A0A0A6YYA0 188 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 TRAV1-1A0A0B4J248 108 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 LOC107986453A0A1B0GWG9 222 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 A0A1W2PRS3 328 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 GRIFINA4D1Z8 144 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 CRYM-AS1A6NIL9 109 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 RNF212BA8MTL3 300 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 CEBPZOSA8MTT3 80 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 CORTO00230 105 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 CEACAM4O75871 244 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 GOSR1O95249 250 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 HLA-DQA2P01906 255 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 HIST1H1DP16402 221 aaKnown RBP3.4□□□□□ -1.86
CNGA1-201ENST00000358519 FAHP16930 419 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 SNU13P55769 128 aaKnown RBP3.4□□□□□ -1.86
CNGA1-201ENST00000358519 MTCP1P56278 107 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 RPL15P61313 204 aaKnown RBP3.4□□□□□ -1.86
CNGA1-201ENST00000358519 PCBD1P61457 104 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 ARF6P62330 175 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 RPL23P62829 140 aaKnown RBP3.4□□□□□ -1.86
CNGA1-201ENST00000358519 GRB2P62993 217 aaKnown RBP3.4□□□□□ -1.86
CNGA1-201ENST00000358519 GNMTQ14749 295 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 SNAI3Q3KNW1 292 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 C1orf140Q5VVS0 124 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 PRSS57Q6UWY2 283 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 IGFL3Q6UXB1 125 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 MEX3BQ6ZN04 569 aaKnown RBP3.4□□□□□ -1.86
CNGA1-201ENST00000358519 CYP2G1PQ6ZSU1 146 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 OR4N5Q8IXE1 308 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 LGI3Q8N145 548 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 FAM169BQ8N8A8 192 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 OR2M3Q8NG83 312 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 OR5C1Q8NGR4 320 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 SLAMF6Q96DU3 332 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 OBP2BQ9NPH6 170 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 PNO1Q9NRX1 252 aaKnown RBP3.4□□□□□ -1.86
CNGA1-201ENST00000358519 EMC9Q9Y3B6 208 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 LRP12Q9Y561 859 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 PXMP4Q9Y6I8 212 aa3.4□□□□□ -1.86
CNGA1-201ENST00000358519 A0A0U1RQK1 487 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 IGSF23A1L1A6 192 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 GAGE12BA1L429 117 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 LRRC3CA6NJW4 275 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 ZNF891A8MT65 544 aaPredicted RBP3.4□□□□□ -1.87
CNGA1-201ENST00000358519 TMEM14DPA8MWL7 114 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 C22orf46C9J442 243 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 DIRC3C9JPN6 131 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 KLRC4-KLRK1H3BQV0 150 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 TGFBR3LH3BV60 316 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 PITX3O75364 302 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 MPIG6BO95866 241 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 P04436 131 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 GLI4P10075 376 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 IL3RAP26951 378 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 DUSP1P28562 367 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 TSPOP30536 169 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 TAS2R46P59540 309 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 RNPS1Q15287 305 aaKnown RBP3.4□□□□□ -1.87
CNGA1-201ENST00000358519 MLANAQ16655 118 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 HIST3H3Q16695 136 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 PLPPR5Q32ZL2 321 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 TMEM95Q3KNT9 176 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 ALG10Q5BKT4 473 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 FFAR4Q5NUL3 377 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 LCN15Q6UWW0 184 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 SLC22A24Q8N4F4 322 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 TMEM178AQ8NBL3 297 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 PATE1Q8WXA2 126 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 ANAPC16Q96DE5 110 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 STARD4Q96DR4 205 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 WDYHV1Q96HA8 205 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 ARHGAP5-AS1Q96IT6 56 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 BTF3L4Q96K17 158 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 C20orf173Q96LM9 149 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 ATP5SQ99766 215 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 NXF5Q9H1B4 397 aaKnown RBP3.4□□□□□ -1.87
CNGA1-201ENST00000358519 BANF2Q9H503 90 aa3.4□□□□□ -1.87
CNGA1-201ENST00000358519 SLC35D1Q9NTN3 355 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms